RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 RGS1Q08116 209 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PCDH1Q08174 1060 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 ZNF763Q0D2J5 394 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 LRRC74AQ0VAA2 488 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 EIF2B5Q13144 721 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 GPR18Q14330 331 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 CLCA4Q14CN2 919 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 INAVAQ3KP66 663 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 UGT3A2Q3SY77 523 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 ZNF542PQ5EBM4 170 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 COQ5Q5HYK3 327 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 TCHHL1Q5QJ38 904 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 C6orf136Q5SQH8 315 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 IL23RQ5VWK5 629 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 TMEM198Q66K66 360 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PMS2CLQ68D20 193 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 TRIM40Q6P9F5 258 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 ZC3H14Q6PJT7 736 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 CYP20A1Q6UW02 462 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 BNC2Q6ZN30 1099 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 SLCO4C1Q6ZQN7 724 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 LIAT1Q6ZQX7 453 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 GK5Q6ZS86 529 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 R3HCC1LQ7Z5L2 792 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 NUDT13Q86X67 352 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.96□□□□□ -1.46
LIG3-206ENST00000586058 LAS2Q8IYD9 372 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 LIX1Q8N485 282 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 C2orf73Q8N5S3 287 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 POU5F2Q8N7G0 328 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 KYQ8NBH2 561 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 SRFBP1Q8NEF9 429 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 ZNF548Q8NEK5 533 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 TRPV3Q8NET8 790 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 VPS37AQ8NEZ2 397 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 OR7G3Q8NG95 312 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 OR4E2Q8NGC2 313 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 DNAJB8Q8NHS0 232 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 CEP76Q8TAP6 659 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 DNASE2BQ8WZ79 361 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 N4BP2L2Q92802 583 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 RERGQ96A58 199 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 ROPN1LQ96C74 230 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 WDR34Q96EX3 536 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 MTERF1Q99551 399 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 SLC38A3Q99624 504 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 DUSP23Q9BVJ7 150 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 ACPTQ9BZG2 426 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 BRINP2Q9C0B6 783 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 XKR8Q9H6D3 395 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 NT5DC2Q9H857 520 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 EBF2Q9HAK2 575 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 TNFRSF12AQ9NP84 129 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 TMEM184CQ9NVA4 438 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 ATAD3AQ9NVI7 634 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 ARL8BQ9NVJ2 186 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 C2orf42Q9NWW7 574 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 ASIC5Q9NY37 505 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 CPNE7Q9UBL6 633 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PRPF19Q9UMS4 504 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 ICKQ9UPZ9 632 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 TSC22D4Q9Y3Q8 395 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PLEKHM1Q9Y4G2 1056 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PCYT1BQ9Y5K3 369 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 PTGDR2Q9Y5Y4 395 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 TRBV23OR9-2A0A075B6M9 112 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 A0A0J9YY10 115 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 LOC100653049A0A140TA62 436 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 A0A1B0GTL3 188 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 A0A1W2PR77 199 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 TRBC2A0A5B9 178 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 FAM234BA2RU67 622 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 LILRA5A6NI73 299 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 PRR19A6NJB7 356 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 MAGEB17A8MXT2 336 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 NVLO15381 856 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 NDUFS4O43181 175 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 OR1F1O43749 312 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 DUX1O43812 170 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 PCDH7O60245 1069 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 NRP2O60462 931 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 PRMT3O60678 531 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 GMNNO75496 209 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 KRT34O76011 436 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 WFS1O76024 890 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SEMA3DO95025 777 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 KCNH1O95259 989 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ANP32DO95626 131 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 FUCA1P04066 466 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 CFIP05156 583 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 IL6P05231 212 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SYPP08247 313 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ANXA4P09525 319 aaPredicted RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 ALDOCP09972 364 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 PRR35P0CG20 571 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 COX7A2P14406 83 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 BCKDHBP21953 392 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 CDH3P22223 829 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 JAK1P23458 1154 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 MAOBP27338 520 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms