RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 RHOJQ9H4E5 214 aa8.27□□□□□ -1.09
ATG4D-202ENST00000585437 RABEP2Q9H5N1 569 aa8.27□□□□□ -1.09
ATG4D-202ENST00000585437 WDR70Q9NW82 654 aa8.27□□□□□ -1.09
ATG4D-202ENST00000585437 GEMIN8Q9NWZ8 242 aaKnown RBP8.27□□□□□ -1.09
ATG4D-202ENST00000585437 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.27□□□□□ -1.09
ATG4D-202ENST00000585437 STOX2Q9P2F5 926 aaPredicted RBP8.27□□□□□ -1.09
ATG4D-202ENST00000585437 PRDM4Q9UKN5 801 aa8.27□□□□□ -1.09
ATG4D-202ENST00000585437 PDE10AQ9Y233 779 aa8.27□□□□□ -1.09
ATG4D-202ENST00000585437 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.09
ATG4D-202ENST00000585437 TENM4Q6N022 2769 aa8.27□□□□□ -1.09
ATG4D-202ENST00000585437 DOCK10Q96BY6 2186 aa8.27□□□□□ -1.09
ATG4D-202ENST00000585437 ZNF462Q96JM2 2506 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 FAM95CA0A1B0GW59 222 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 A0A1B0GX78 115 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 CXorf49A8MYA2 514 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 TYROBPO43914 113 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 SRPX2O60687 465 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 CNOT3O75175 753 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 KLF7O75840 302 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 ENO2P09104 434 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 FAM87AP0C7U9 286 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 PRKAR1AP10644 381 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 EZRP15311 586 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 CMPK1P30085 196 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 RPA3P35244 121 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 PGGT1BP53609 377 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 EMP3P54852 163 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 POLE2P56282 527 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 CORO7P57737 925 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 TBPL1P62380 186 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 RPS15P62841 145 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 PRDX1Q06830 199 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 PDAP1Q13442 181 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 EFTUD2Q15029 972 aaKnown RBP eCLIP8.26□□□□□ -1.093e-8■■□□□ 13.7
ATG4D-202ENST00000585437 PDK4Q16654 411 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 PTCHD3Q3KNS1 767 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 TCTE1Q5JU00 501 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 YOD1Q5VVQ6 348 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 FRMPD2BQ6IN97 320 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 MRPL14Q6P1L8 145 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 TMEM207Q6UWW9 146 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 STRA8Q7Z7C7 330 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 MCATQ8IVS2 390 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 APLFQ8IW19 511 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 TRIM42Q8IWZ5 723 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 LRRC34Q8IZ02 419 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 MYO1HQ8N1T3 1032 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 ARHGEF39Q8N4T4 335 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 ZNF655Q8N720 491 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 PPM1NQ8N819 430 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 ENDOVQ8N8Q3 282 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 GBP7Q8N8V2 638 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 GPATCH11Q8N954 259 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 PPFIBP2Q8ND30 876 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 LRRC8CQ8TDW0 803 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 N4BP2L2Q92802 583 aaPredicted RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 MRRFQ96E11 262 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 LINGO1Q96FE5 620 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 VPS39Q96JC1 886 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 CCDC138Q96M89 665 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 RBBP8Q99708 897 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 ZFYVE21Q9BQ24 234 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 ACAT2Q9BWD1 397 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 SGPP1Q9BX95 441 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 SLC26A1Q9H2B4 701 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 PARVBQ9HBI1 364 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 POPDC3Q9HBV1 291 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 SLC22A11Q9NSA0 550 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 STARD5Q9NSY2 213 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 MKS1Q9NXB0 559 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 TXNDC16Q9P2K2 825 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 DHCR7Q9UBM7 475 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 TAC3Q9UHF0 121 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 IKZF3Q9UKT9 509 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 TCFL5Q9UL49 500 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 POLHQ9Y253 713 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 FARSAQ9Y285 508 aaKnown RBP8.26□□□□□ -1.09
ATG4D-202ENST00000585437 VWA7Q9Y334 891 aa8.26□□□□□ -1.09
ATG4D-202ENST00000585437 BAHCC1Q9P281 2608 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 TCP11X1B4DZS4 312 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 DSCR3O14972 297 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 CCNDBP1O95273 360 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 MED26O95402 600 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 SFTPCP11686 197 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 CREB1P16220 341 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 CCR10P46092 362 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 ARSFP54793 590 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 AP1S2P56377 157 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 TAS2R39P59534 338 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 IL2P60568 153 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 ABATP80404 500 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 NFKB2Q00653 900 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 SLC18A2Q05940 514 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 ERV3-1Q14264 604 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 GRM7Q14831 915 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 PRTGQ2VWP7 1150 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 FBXO42Q6P3S6 717 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 AGTRAPQ6RW13 159 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 LCTLQ6UWM7 567 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 MBOAT1Q6ZNC8 495 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms