RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 OR2M4Q96R27 311 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 OR4K3Q96R72 315 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 FERD3LQ96RJ6 166 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 DPY30Q9C005 99 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PCED1AQ9H1Q7 454 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 NT5DC2Q9H857 520 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PELI2Q9HAT8 420 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 SPAG4Q9NPE6 437 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 SLC52A3Q9NQ40 469 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 FSCN3Q9NQT6 498 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 FARSBQ9NSD9 589 aaKnown RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 VPS29Q9UBQ0 182 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 GIMAP2Q9UG22 337 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 SUFUQ9UMX1 484 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 RUVBL1Q9Y265 456 aaKnown RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 PRKAB1Q9Y478 270 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PCDHGA7Q9Y5G6 932 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 COLEC10Q9Y6Z7 277 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PLXND1Q9Y4D7 1925 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 CEP192Q8TEP8 1941 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 E7EQ34 232 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 ANKRD28O15084 1053 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 PRAMEF4O60810 478 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 ENTPD5O75356 428 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 PSMG1O95456 288 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 FUCA1P04066 466 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 PROS1P07225 676 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 AMD1P17707 334 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 HRH2P25021 359 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 VARSP26640 1264 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 GCKP35557 465 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 PIK3CBP42338 1070 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 RABIFP47224 123 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 THOP1P52888 689 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 CLDN8P56748 225 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 TBPL1P62380 186 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 AP2B1P63010 937 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 RPL38P63173 70 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 HMGCS1Q01581 520 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 RPL6Q02878 288 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 FOXC1Q12948 553 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 KRT33BQ14525 404 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 KIAA0040Q15053 153 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 ZNF423Q2M1K9 1284 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 DPY19L1Q2PZI1 675 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 VPS26BQ4G0F5 336 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 PRAMEF14Q5SWL7 426 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 THEMIS2Q5TEJ8 643 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 PRAMEF9Q5VWM5 478 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 PRAMEF13Q5VWM6 474 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 ENPP7Q6UWV6 458 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 ABRAXAS1Q6UWZ7 409 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 RIPOR1Q6ZS17 1223 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 MSANTD1Q6ZTZ1 278 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 C17orf64Q86WR6 236 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 DCP2Q8IU60 420 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 DEFB124Q8NES8 71 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 OR5AR1Q8NGP9 310 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 OR9I1Q8NGQ6 314 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 WDR60Q8WVS4 1066 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 ZFPM2Q8WW38 1151 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 NEIL2Q969S2 332 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 SH3KBP1Q96B97 665 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 MTFMTQ96DP5 389 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 CLPTM1LQ96KA5 538 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 FCRL1Q96LA6 429 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 BMFQ96LC9 184 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 C12orf66Q96MD2 445 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 CAMK1GQ96NX5 476 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 GPATCH1Q9BRR8 931 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 C1orf50Q9BV19 199 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 ACPTQ9BZG2 426 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 TRNAU1APQ9NX07 287 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 SIRT5Q9NXA8 310 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 WSB2Q9NYS7 404 aaPredicted RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 ADA2Q9NZK5 511 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 TMEM181Q9P2C4 612 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 MAP10Q9P2G4 905 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 STX18Q9P2W9 335 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 MOSPD1Q9UJG1 213 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 PCOLCE2Q9UKZ9 415 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 POMPQ9Y244 141 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 TDRKHQ9Y2W6 561 aaKnown RBP10.02□□□□□ -0.81
LIG3-203ENST00000585370 KNL1Q8NG31 2342 aa10.02□□□□□ -0.81
LIG3-203ENST00000585370 IGHV1OR15-9A0A0B4J2B8 117 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 POM121BA6NF01 834 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 DNAJA2O60884 412 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 BCKDHAP12694 445 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 CAPN3P20807 821 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 PRPS1L1P21108 318 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 CD6P30203 668 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 ASMTP46597 345 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 ZFP36L2P47974 494 aaKnown RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 HNRNPFP52597 415 aaKnown RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 NME5P56597 212 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 C21orf58P58505 322 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 SRSF11Q05519 484 aaKnown RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 TLR1Q15399 786 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 DUOXA1Q1HG43 343 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 SPIN4Q56A73 249 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms