RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SEMA5BQ9P283 1151 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 DCTN4Q9UJW0 460 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 FIS1Q9Y3D6 152 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 CCL27Q9Y4X3 112 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 TLCD2A6NGC4 264 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 NDUFAB1O14561 156 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 ULK1O75385 1050 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 HSD3B1P14060 373 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 MAGP20916 626 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 ACP1P24666 158 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 HSD3B2P26439 372 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 GSTM2P28161 218 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 ALDH4A1P30038 563 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 SERPINB1P30740 379 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 CSF2RBP32927 897 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 SCTRP47872 440 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 IDH3AP50213 366 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 ARFIP2P53365 341 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 CFHR1Q03591 330 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 GABPB1Q06547 395 aaPredicted RBP15.49■□□□□ 0.07
SS18-226ENST00000585241 IFT88Q13099 833 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 ABRAXAS2Q15018 415 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 GKAP1Q5VSY0 366 aaPredicted RBP15.49■□□□□ 0.07
SS18-226ENST00000585241 FCRL6Q6DN72 434 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 WDR74Q6RFH5 385 aaPredicted RBP15.49■□□□□ 0.07
SS18-226ENST00000585241 TMIGD1Q6UXZ0 262 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 ZNF740Q8NDX6 193 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 THOC1Q96FV9 657 aaKnown RBP15.49■□□□□ 0.07
SS18-226ENST00000585241 CCDC28BQ9BUN5 200 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 TMEM120AQ9BXJ8 343 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 SEMA6CQ9H3T2 930 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 ELOVL6Q9H5J4 265 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 ADGRE2Q9UHX3 823 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 APOBEC2Q9Y235 224 aaKnown RBP15.49■□□□□ 0.07
SS18-226ENST00000585241 BTRCQ9Y297 605 aa15.49■□□□□ 0.07
SS18-226ENST00000585241 MYO15AQ9UKN7 3530 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 A0A0G2JND7 137 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 CPED1A4D0V7 1026 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 FOXE1O00358 373 aaPredicted RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 HAT1O14929 419 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 CAPN5O15484 640 aaPredicted RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 CBFA2T3O75081 653 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 LDOC1O95751 146 aaPredicted RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 PDYNP01213 254 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 GP1BAP07359 652 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 PRR35P0CG20 571 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 EZRP15311 586 aaKnown RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 CKMT2P17540 419 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 PRPH2P23942 346 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 GRK3P35626 688 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 PIK3CBP42338 1070 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 DAB2P98082 770 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 MEF2AQ02078 507 aaPredicted RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 CSTF3Q12996 717 aaKnown RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 TUBB3Q13509 450 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 TERF2Q15554 542 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 SLC9B1Q4ZJI4 515 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 VWA5B1Q5TIE3 1220 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 NKAIN2Q5VXU1 208 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 FIGLAQ6QHK4 219 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 Q6ZSR9 355 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 RNF44Q7L0R7 432 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 VN1R5Q7Z5H4 357 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 PLXDC1Q8IUK5 500 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 NAXDQ8IW45 347 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 GBP7Q8N8V2 638 aaPredicted RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 ANKS4BQ8N8V4 417 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 ANKRD53Q8N9V6 530 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 TTLQ8NG68 377 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 IFI44Q8TCB0 444 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 ACTRT2Q8TDY3 377 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 SELENOMQ8WWX9 145 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 ZDHHC12Q96GR4 267 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 AHCYL2Q96HN2 611 aaKnown RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 CNDP2Q96KP4 475 aaKnown RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 C3orf30Q96M34 536 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 PPM1MQ96MI6 270 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 TRAPPC9Q96Q05 1148 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 DPYSL5Q9BPU6 564 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 CCDC3Q9BQI4 270 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 EBF4Q9BQW3 602 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 BRF2Q9HAW0 419 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 FARSBQ9NSD9 589 aaKnown RBP15.48■□□□□ 0.07
SS18-226ENST00000585241 PILRAQ9UKJ1 303 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 PTGDR2Q9Y5Y4 395 aa15.48■□□□□ 0.07
SS18-226ENST00000585241 A0A1W2PQM1 296 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 SLC28A1O00337 649 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 NRP2O60462 931 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 DIAPH2O60879 1101 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 VPS4BO75351 444 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 ST6GAL1P15907 406 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 CDH3P22223 829 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 AHRP35869 848 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 GFERP55789 205 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 RPS15AP62244 130 aaKnown RBP15.47■□□□□ 0.07
SS18-226ENST00000585241 ZIC1Q15915 447 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 AASDHQ4L235 1098 aaPredicted RBP15.47■□□□□ 0.07
SS18-226ENST00000585241 IRGCQ6NXR0 463 aa15.47■□□□□ 0.07
SS18-226ENST00000585241 LARP4Q71RC2 724 aaKnown RBP eCLIP15.47■□□□□ 0.07
SS18-226ENST00000585241 PRSS42Q7Z5A4 293 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms