RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 FAM129AQ9BZQ8 928 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 DRC3Q9H069 523 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 SAYSD1Q9NPB0 183 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 SLAMF7Q9NQ25 335 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 C14orf105Q9NVL8 296 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 MOCS1Q9NZB8 636 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 TXNDC16Q9P2K2 825 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 TRPC4Q9UBN4 977 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 FBXL4Q9UKA2 621 aa11.79□□□□□ -0.52
SS18-225ENST00000585121 KCNE1BA0A087WTH5 132 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 FAM95CA0A1B0GW59 222 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 FANCGO15287 622 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 RAD51CO43502 376 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 TSPAN12O95859 305 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 CXCR2P25025 360 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
SS18-225ENST00000585121 MLLT10P55197 1068 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 SOX8P57073 446 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 MRPS25P82663 173 aaKnown RBP11.78□□□□□ -0.52
SS18-225ENST00000585121 CAV1Q03135 178 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 KLC1Q07866 573 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 C2orf54Q08AI8 447 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 FAM53BQ14153 422 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 FASTKD3Q14CZ7 662 aaKnown RBP11.78□□□□□ -0.52
SS18-225ENST00000585121 PHKG1Q16816 387 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 NADK2Q4G0N4 442 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 ZC3HC1Q86WB0 502 aaKnown RBP11.78□□□□□ -0.52
SS18-225ENST00000585121 CAMKVQ8NCB2 501 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 KIF18AQ8NI77 898 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 OLFM1Q99784 485 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 SGPP1Q9BX95 441 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 RAB17Q9H0T7 212 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 MKKSQ9NPJ1 570 aaPredicted RBP11.78□□□□□ -0.52
SS18-225ENST00000585121 C3orf18Q9UK00 162 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 MAP4K5Q9Y4K4 846 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 HS3ST3B1Q9Y662 390 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 RP1L1Q8IWN7 2480 aaPredicted RBP11.78□□□□□ -0.52
SS18-225ENST00000585121 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
SS18-225ENST00000585121 IGLV3-12A0A075B6K2 115 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 SOCS6O14544 535 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 MAP2K7O14733 419 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 PCDH17O14917 1159 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 TP73O15350 636 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 VPS4BO75351 444 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 MED26O95402 600 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 GUCA1CO95843 209 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 HEXBP07686 556 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 ACPPP15309 386 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 CCR8P51685 355 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 EMP2P54851 167 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 CSNK1G2P78368 415 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 CBLBQ13191 982 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 JMJD6Q6NYC1 403 aaPredicted RBP11.77□□□□□ -0.52
SS18-225ENST00000585121 KIRREL2Q6UWL6 708 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 CAPN12Q6ZSI9 719 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 ZADH2Q8N4Q0 377 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 DTWD1Q8N5C7 304 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 CPT1CQ8TCG5 803 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 ANKRD7Q92527 254 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 FBXL8Q96CD0 374 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 RHOJQ9H4E5 214 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 VPS4AQ9UN37 437 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 NOVA2Q9UNW9 492 aaKnown RBP11.77□□□□□ -0.52
SS18-225ENST00000585121 PSAT1Q9Y617 370 aa11.77□□□□□ -0.52
SS18-225ENST00000585121 PCM1Q15154 2024 aa11.77□□□□□ -0.53
SS18-225ENST00000585121 FER1L5A0AVI2 2057 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 A0A0A6YYC8 382 aaPredicted RBP11.76□□□□□ -0.53
SS18-225ENST00000585121 I3L1I5 382 aaPredicted RBP11.76□□□□□ -0.53
SS18-225ENST00000585121 GSTA2P09210 222 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 SLC35G6P0C7Q6 338 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 CDH1P12830 882 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 NPPBP16860 134 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 ZNF37AP17032 561 aaPredicted RBP11.76□□□□□ -0.53
SS18-225ENST00000585121 SLC26A3P40879 764 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 PLTPP55058 493 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 POU4F1Q01851 419 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 CKAP4Q07065 602 aaKnown RBP11.76□□□□□ -0.53
SS18-225ENST00000585121 CSHL1Q14406 222 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 VWA2Q5GFL6 755 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 AGAP7PQ5VUJ5 663 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 FRA10AC1Q70Z53 315 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 OR56A3Q8NH54 315 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 SLC13A3Q8WWT9 602 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 PNPLA2Q96AD5 504 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 MIB2Q96AX9 1013 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 TSPAN17Q96FV3 270 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 AGAP4Q96P64 663 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 EGFL8Q99944 293 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 TGIF2Q9GZN2 237 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 LHPPQ9H008 270 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 ZNF552Q9H707 407 aaPredicted RBP11.76□□□□□ -0.53
SS18-225ENST00000585121 POPDC3Q9HBV1 291 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 GPAMQ9HCL2 828 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 CTNNAL1Q9UBT7 734 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 PLAAQ9Y263 795 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 DYRK1BQ9Y463 629 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 IDSB3KWA1 339 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms