RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 TFR2Q9UP52 801 aa13.06□□□□□ -0.32
CSNK1D-211ENST00000579316 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
CSNK1D-211ENST00000579316 PRSS21Q9Y6M0 314 aa13.06□□□□□ -0.32
CSNK1D-211ENST00000579316 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 PSTPIP1O43586 416 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 RPN2P04844 631 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 EIF2S1P05198 315 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 PRSS56P0CW18 603 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 ERVK-10P10266 1014 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 COMTP21964 271 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 OC90Q02509 493 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 PMPCAQ10713 525 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 ITIH4Q14624 930 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 BRD3Q15059 726 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 EXT1Q16394 746 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 CMPK2Q5EBM0 449 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 EMC4Q5J8M3 183 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 GARNL3Q5VVW2 1013 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 ARSKQ6UWY0 536 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 PACS1Q6VY07 963 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 PID1Q7Z2X4 250 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 RFX6Q8HWS3 928 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 SLC22A15Q8IZD6 547 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 SYCE1Q8N0S2 351 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 SLC5A8Q8N695 610 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 GOT1L1Q8NHS2 421 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 M1APQ8TC57 530 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 COX4I2Q96KJ9 171 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 ZFYVE21Q9BQ24 234 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 RAB11FIP5Q9BXF6 653 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 VN1R1Q9GZP7 353 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 LACRTQ9GZZ8 138 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 TRIM45Q9H8W5 580 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 C19orf25Q9UFG5 118 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 RSPH14Q9UHP6 348 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 TRHDEQ9UKU6 1024 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 ALG6Q9Y672 507 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 ZNF407Q9C0G0 2248 aa13.05□□□□□ -0.32
CSNK1D-211ENST00000579316 IGHV3-20A0A0C4DH32 117 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 MACROD2A1Z1Q3 448 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 OR2A25A4D2G3 310 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 TFECO14948 347 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 FOXS1O43638 330 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 ANXA9O76027 345 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 KRT1P04264 644 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 ANXA5P08758 320 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 TNNT1P13805 278 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 TFEBP19484 476 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 PEX19P40855 299 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 ST13P50502 369 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 GEMP55040 296 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 DYNLT1P63172 113 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 CCZ1BP86790 482 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 CCZ1P86791 482 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 MAPKAPK3Q16644 382 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 ARHGAP11AQ6P4F7 1023 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 LANCL3Q6ZV70 420 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 TAS2R42Q7RTR8 314 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 RNF10Q8N5U6 811 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 OR2L3Q8NG85 312 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 HMGCLL1Q8TB92 370 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 MMABQ96EY8 250 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 DNAJC1Q96KC8 554 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 CYTH2Q99418 400 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 GBA3Q9H227 469 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 SMARCAL1Q9NZC9 954 aa13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 SAE1Q9UBE0 346 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 RUVBL1Q9Y265 456 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-211ENST00000579316 ANK2Q01484 3957 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 A6NNC1 897 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 H0YGG7 62 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 PHF2O75151 1096 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 PECAM1P16284 738 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 PCSK6P29122 969 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 KIR2DL3P43628 341 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 ARF3P61204 181 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 SYT16Q17RD7 645 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 ZNF468Q5VIY5 522 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 FBXO42Q6P3S6 717 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 ZNF227Q86WZ6 799 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 CSNK1A1LQ8N752 337 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 PDLIM2Q96JY6 352 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 PWWP2AQ96N64 755 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 MIPEPQ99797 713 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 APOL2Q9BQE5 337 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 SARGQ9BW04 601 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 SLC6A16Q9GZN6 736 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 SYNPO2LQ9H987 977 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 CIDEBQ9UHD4 219 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 ADAM21Q9UKJ8 722 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 HYOU1Q9Y4L1 999 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
CSNK1D-211ENST00000579316 PRMT3O60678 531 aa13.02□□□□□ -0.33
CSNK1D-211ENST00000579316 PSMB5P28074 263 aa13.02□□□□□ -0.33
CSNK1D-211ENST00000579316 SLC25A35Q3KQZ1 300 aa13.02□□□□□ -0.33
CSNK1D-211ENST00000579316 SHEQ5VZ18 495 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms