RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ZFHX4Q86UP3 3567 aa6.26□□□□□ -1.41
TRAF4-213ENST00000578917 KCNE1BA0A087WTH5 132 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 A0A0A6YYC8 382 aaPredicted RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 IGKV1-8A0A0C4DH67 115 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 FEZF1A0PJY2 475 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 FITM1A5D6W6 292 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 B8ZZF3 427 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 POC1B-GALNT4F8VUJ3 575 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 I3L1I5 382 aaPredicted RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 TERTO14746 1132 aaKnown RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 CLGNO14967 610 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 NRP2O60462 931 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 KLF7O75840 302 aaPredicted RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 WDR47O94967 919 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ALBP02768 609 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 CAPN1P07384 714 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 UQCRHP07919 91 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 INHBAP08476 426 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SLC35G6P0C7Q6 338 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 GNAZP19086 355 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 CXCR2P25025 360 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 TYK2P29597 1187 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 MSH2P43246 934 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 PGDP52209 483 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 PMS2P54278 862 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 CSNK1G2P78368 415 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 MEF2AQ02078 507 aaPredicted RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 RELAQ04206 551 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 CHAF1BQ13112 559 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 IL10RAQ13651 578 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ATP1A4Q13733 1029 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 RBBP5Q15291 538 aaKnown RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 RBBP7Q16576 425 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 FAM83EQ2M2I3 478 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 HKDC1Q2TB90 917 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 LGSNQ5TDP6 509 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 MFSD4BQ5TF39 518 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 GARNL3Q5VVW2 1013 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 KLC3Q6P597 504 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 PCSK4Q6UW60 755 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 LCTLQ6UWM7 567 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 TMEM207Q6UWW9 146 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ASB18Q6ZVZ8 466 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 MED25Q71SY5 747 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 RNF44Q7L0R7 432 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 THOC6Q86W42 341 aaKnown RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 LRRC56Q8IYG6 542 aaPredicted RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 TCAIMQ8N3R3 496 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF843Q8N446 348 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 TMEM102Q8N9M5 508 aaPredicted RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SNX31Q8N9S9 440 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 TEX19Q8NA77 164 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 OR2Y1Q8NGV0 311 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 OR56A3Q8NH54 315 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 UHMK1Q8TAS1 419 aaKnown RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 STAG3L4Q8TBR4 150 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ANKRD49Q8WVL7 239 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SLC5A11Q8WWX8 675 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 EXT2Q93063 718 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 THAP11Q96EK4 314 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 FER1L6-AS2Q96M78 137 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 OR2A5Q96R48 311 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 GPR22Q99680 433 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 MACROD1Q9BQ69 325 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 AIF1LQ9BQI0 150 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 CCDC77Q9BR77 488 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SLC25A23Q9BV35 468 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SGPP1Q9BX95 441 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 CAPS2Q9BXY5 557 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SEMA4CQ9C0C4 833 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 DERL2Q9GZP9 239 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 DRC3Q9H069 523 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SOX17Q9H6I2 414 aaPredicted RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 WDR54Q9H977 334 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 NMRAL1Q9HBL8 299 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ANKHQ9HCJ1 492 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ATP13A2Q9NQ11 1180 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ZDHHC18Q9NUE0 388 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 WWOXQ9NZC7 414 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 TUBD1Q9UJT1 453 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 NXT1Q9UKK6 140 aaKnown RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 NFU1Q9UMS0 254 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 RUVBL1Q9Y265 456 aaKnown RBP6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SLC22A14Q9Y267 594 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 OARD1Q9Y530 152 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 ANGPTL3Q9Y5C1 460 aa6.25□□□□□ -1.41
TRAF4-213ENST00000578917 SDK2Q58EX2 2172 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 COL27A1Q8IZC6 1860 aaPredicted RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF106Q9H2Y7 1883 aaKnown RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 A0A087WUV0 522 aaPredicted RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 A0A087X1B8 175 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 SUPT3HB4E1H0 165 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 H3BMH7 237 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 NDUFS4O43181 175 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 SLC28A2O43868 658 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 CCNT2O60583 730 aaKnown RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 KLHL41O60662 606 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 SUPT3HO75486 399 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 STK16O75716 305 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms