RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 NCF1P14598 390 aaPredicted RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 TCN2P20062 427 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ALDH18A1P54886 795 aaKnown RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 RPS15P62841 145 aaKnown RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 DCDP81605 110 aaKnown RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CDC16Q13042 620 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 TECRLQ5HYJ1 363 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PRAMEF17Q5VTA0 474 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ZNF385CQ66K41 422 aaPredicted RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 INO80CQ6PI98 192 aaPredicted RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 NXPE4Q6UWF7 544 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 OR4N4Q8N0Y3 316 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PLD6Q8N2A8 252 aaKnown RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 SLC38A9Q8NBW4 561 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CAMKVQ8NCB2 501 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 UBTD2Q8WUN7 234 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 HNRNPLLQ8WVV9 542 aaKnown RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 NEIL2Q969S2 332 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MVB12AQ96EY5 273 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 SEC16BQ96JE7 1060 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CD244Q9BZW8 370 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CUTCQ9NTM9 273 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 DCDC2Q9UHG0 476 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CDC14AQ9UNH5 594 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 FER1L5A0AVI2 2057 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 USP24Q9UPU5 2620 aa13.27□□□□□ -0.28
SNORD3B-1-201ENST00000577988 FREM2Q5SZK8 3169 aa13.27□□□□□ -0.28
SNORD3B-1-201ENST00000577988 TEX51A0A1B0GUA7 166 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 A0A1B0GX78 115 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 HYKKA2RU49 373 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 C9J4A7 227 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TERTO14746 1132 aaKnown RBP13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 HAT1O14929 419 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CLGNO14967 610 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 DSCR3O14972 297 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 EFSO43281 561 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SHBGP04278 402 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 C1GALT1C1LP0DN25 315 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 LIFP15018 202 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GSTM2P28161 218 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 AHRP35869 848 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 DLSTP36957 453 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GMPRP36959 345 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GLRBP48167 497 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 HSPA7P48741 367 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 DNASE1L3Q13609 305 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 FAM53BQ14153 422 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SETDB1Q15047 1291 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 NDUFA9Q16795 377 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ATG9BQ674R7 924 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 FRMPD2BQ6IN97 320 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PRMT9Q6P2P2 845 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CSNK1A1LQ8N752 337 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MFSD9Q8NBP5 474 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MZB1Q8WU39 189 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SCYL1Q96KG9 808 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GBP5Q96PP8 586 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TMEM79Q9BSE2 394 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CHST8Q9H2A9 424 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MRPL46Q9H2W6 279 aaKnown RBP13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PRORYQ9H606 182 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 NT5DC2Q9H857 520 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CROTQ9UKG9 612 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SH2B3Q9UQQ2 575 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 FARSAQ9Y285 508 aaKnown RBP13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ZNF891A8MT65 544 aaPredicted RBP13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 STX16-NPEPL1H3BU86 382 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 K7EPI3 171 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 UBXN8O00124 270 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 STX16O14662 325 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PRPF4O43172 522 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 NRP2O60462 931 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ALBP02768 609 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 EIF2S1P05198 315 aaKnown RBP13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GFAPP14136 432 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 KRT15P19012 456 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ALAS2P22557 587 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GDF5P43026 501 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PIK3CGP48736 1102 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 REEP5Q00765 189 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 IFFO1Q0D2I5 559 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 LAPTM5Q13571 262 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PWP1Q13610 501 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 NAA30Q147X3 362 aaPredicted RBP13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PCBP2Q15366 365 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TBCCQ15814 346 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PDK4Q16654 411 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CATSPEREQ5SY80 951 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SLCO4C1Q6ZQN7 724 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TTLL10Q6ZVT0 673 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GPR155Q7Z3F1 870 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 VASH2Q86V25 355 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 KRT78Q8N1N4 520 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TRPV3Q8NET8 790 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TTLQ8NG68 377 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CT55Q8WUE5 264 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 EXT2Q93063 718 aa13.26□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TM4SF19Q96DZ7 209 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms