RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 MORF4L1Q9UBU8 362 aa1.93□□□□□ -2.1
TOP2A-202ENST00000577541 ZNF510Q9Y2H8 683 aa1.93□□□□□ -2.1
TOP2A-202ENST00000577541 SNX8Q9Y5X2 465 aa1.93□□□□□ -2.1
TOP2A-202ENST00000577541 TRAV24A0A0B4J272 114 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 IGHV3-38A0A0C4DH36 116 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 SNURFLB1AK76 121 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 TRAFD1O14545 582 aaPredicted RBP1.92□□□□□ -2.1
TOP2A-202ENST00000577541 FPGTO14772 594 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 IPO8O15397 1037 aaKnown RBP1.92□□□□□ -2.1
TOP2A-202ENST00000577541 TLX2O43763 284 aaPredicted RBP1.92□□□□□ -2.1
TOP2A-202ENST00000577541 CD59P13987 128 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 CD22P20273 847 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 DNASE1P24855 282 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 ELAVL4P26378 380 aaKnown RBP1.92□□□□□ -2.1
TOP2A-202ENST00000577541 TRAP1Q12931 704 aaKnown RBP1.92□□□□□ -2.1
TOP2A-202ENST00000577541 IL11RAQ14626 422 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 VWC2Q2TAL6 325 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 RILPL1Q5EBL4 403 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 SEL1L3Q68CR1 1132 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 LCLAT1Q6UWP7 414 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 FCRLAQ7L513 359 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 ZER1Q7Z7L7 766 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 FAM131BQ86XD5 332 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 GPC2Q8N158 579 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 FGFRL1Q8N441 504 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 TC2NQ8N9U0 490 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 NPRL2Q8WTW4 380 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 C11orf52Q96A22 123 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 CNRIP1Q96F85 164 aaPredicted RBP1.92□□□□□ -2.1
TOP2A-202ENST00000577541 ATXN7L3BQ96GX2 97 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 C2orf48Q96LS8 159 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 SERINC2Q96SA4 455 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 ABHD1Q96SE0 405 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 ATF6BQ99941 703 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 NYXQ9GZU5 481 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 CDH20Q9HBT6 801 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 B3GAT2Q9NPZ5 323 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 HAO2Q9NYQ3 351 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 SWAP70Q9UH65 585 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 LNPEPQ9UIQ6 1025 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 NTNG1Q9Y2I2 539 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 SELENOKQ9Y6D0 94 aa1.92□□□□□ -2.1
TOP2A-202ENST00000577541 IGSF1Q8N6C5 1336 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 IGLV4-3A0A075B6K6 122 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 MTMR11A4FU01 709 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 ADAM20O43506 726 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 EIF5BO60841 1220 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 BEST1O76090 585 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 BAG3O95817 575 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 ABCB1P08183 1280 aaPredicted RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 CD27P26842 260 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 PDHA2P29803 388 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 CASP2P42575 452 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 RAD52P43351 418 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 CCR3P51677 355 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 OR1D5P58170 312 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 DCDC1P59894 354 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 POLR2LP62875 67 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 ZNF177Q13360 481 aaPredicted RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 BECN1Q14457 450 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 KCTD2Q14681 263 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 MS4A18Q3C1V0 323 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 KHDRBS2Q5VWX1 349 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 BAIAP2L2Q6UXY1 529 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 CAMKMTQ7Z624 323 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 PRPF39Q86UA1 669 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 KLHDC1Q8N7A1 406 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 NOA1Q8NC60 698 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 APPL2Q8NEU8 664 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 CHPT1Q8WUD6 406 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 PTERQ96BW5 349 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 ERP27Q96DN0 273 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 THOC1Q96FV9 657 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 PDLIM5Q96HC4 596 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 GCNAQ96QF7 691 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 PSMB7Q99436 277 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 CPNE1Q99829 537 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 CCDC3Q9BQI4 270 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 PUS3Q9BZE2 481 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 DNAI2Q9GZS0 605 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 GOLPH3LQ9H4A5 285 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 ACTL8Q9H568 366 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 ABCB10Q9NRK6 738 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 PPIEQ9UNP9 301 aaKnown RBP1.91□□□□□ -2.1
TOP2A-202ENST00000577541 CHKBQ9Y259 395 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 R4GN57 208 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 IL16Q14005 1332 aa1.91□□□□□ -2.1
TOP2A-202ENST00000577541 TMEM129A0AVI4 362 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 A8MXK9 166 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 CLDN4O14493 209 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 SURF4O15260 269 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 IGKV3-15P01624 115 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 ATP5BP06576 529 aaKnown RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 PRKAR1AP10644 381 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 PCGF2P35227 344 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 MATR3P43243 847 aaKnown RBP eCLIP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 LIG4P49917 911 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 PPP5CP53041 499 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 ZFP36L1Q07352 338 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms