RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SPRP35270 261 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 EIF2S3P41091 472 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 GRIA3P42263 894 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 ERVPABLB-1P60509 514 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 RAB10P61026 200 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 TBPL1P62380 186 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 HSD11B2P80365 405 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 FOXM1Q08050 763 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 PRKAA1Q13131 559 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 NAB1Q13506 487 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 KIR2DS3Q14952 304 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC5A12Q1EHB4 618 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 FBXO48Q5FWF7 155 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 PWWP2BQ6NUJ5 590 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 UGT3A1Q6NUS8 523 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 ARMC6Q6NXE6 501 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 DTX1Q86Y01 620 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 TMEM151BQ8IW70 566 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 MYO1HQ8N1T3 1032 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 PLD6Q8N2A8 252 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 C19orf47Q8N9M1 422 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 OR2L3Q8NG85 312 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 OR1L3Q8NH93 324 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 FBLIM1Q8WUP2 373 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 KCTD4Q8WVF5 259 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 PYCR2Q96C36 320 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 ZNF578Q96N58 590 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 FOPNLQ96NB1 174 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 OR4K3Q96R72 315 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 TAAR9Q96RI9 348 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 ATG10Q9H0Y0 220 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 PARVBQ9HBI1 364 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 POPDC3Q9HBV1 291 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 RRAGDQ9NQL2 400 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 FBXO8Q9NRD0 319 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 TPSG1Q9NRR2 321 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 SNX15Q9NRS6 342 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 ABCF3Q9NUQ8 709 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 SPATA7Q9P0W8 599 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 CTNNAL1Q9UBT7 734 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 TAC3Q9UHF0 121 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 BTRCQ9Y297 605 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 ASB1Q9Y576 335 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 PCDHGA7Q9Y5G6 932 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 PCDHGA3Q9Y5H0 932 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 SDK2Q58EX2 2172 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 A0A087WUV0 522 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 A0A087WV48 116 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 MATN2O00339 956 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 POLR1CO15160 346 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 MED26O95402 600 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 GUCA1CO95843 209 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 C2P06681 752 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 C8GP07360 202 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 ABHD2P08910 425 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 FGF5P12034 268 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 STMN1P16949 149 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 RAB6AP20340 208 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 MAP4P27816 1152 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 RBMS1P29558 406 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 OAS2P29728 719 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 PHBP35232 272 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 MAGEA12P43365 314 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 RGS4P49798 205 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 SP140Q13342 867 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 TUBB3Q13509 450 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 CSHL1Q14406 222 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 SF1Q15637 639 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 FRMPD2BQ6IN97 320 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 AGTRAPQ6RW13 159 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 TRMT10CQ7L0Y3 403 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 SHISA5Q8N114 240 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 DNAJC22Q8N4W6 341 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 EIF1ADQ8N9N8 165 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 OR2W6PQ8NHA6 318 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 AENQ8WTP8 325 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 MZB1Q8WU39 189 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 FGF11Q92914 225 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 ISL2Q96A47 359 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 ESAMQ96AP7 390 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 NXNL1Q96CM4 212 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 GPR78Q96P69 363 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 RUFY1Q96T51 708 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 DDA1Q9BW61 102 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 DERL2Q9GZP9 239 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 SPRTNQ9H040 489 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 THSD1Q9NS62 852 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 FGF21Q9NSA1 209 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 INTS7Q9NVH2 962 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 SOHLH2Q9NX45 425 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 TXNDC16Q9P2K2 825 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 PILRAQ9UKJ1 303 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 ACSL6Q9UKU0 697 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 CORINQ9Y5Q5 1042 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 SNRNP200O75643 2136 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 KNTC1P50748 2209 aa9.08□□□□□ -0.96
NPLOC4-219ENST00000576713 CHD6Q8TD26 2715 aa9.07□□□□□ -0.96
NPLOC4-219ENST00000576713 LOC105369274A0A096LPK9 316 aa9.07□□□□□ -0.96
NPLOC4-219ENST00000576713 LOC102723532A0A0G2JNH3 316 aa9.07□□□□□ -0.96
NPLOC4-219ENST00000576713 NCF1BA6NI72 391 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms