RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 ARHGEF9O43307 516 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 FCGR3BO75015 233 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 ZFYP08048 801 aaPredicted RBP4.27□□□□□ -1.73
CDC27-219ENST00000576484 SCG2P13521 617 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 CD59P13987 128 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 RPL35AP18077 110 aaKnown RBP4.27□□□□□ -1.73
CDC27-219ENST00000576484 PSMB4P28070 264 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 XGP55808 180 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 DRP2Q13474 957 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 TMEM132DQ14C87 1099 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 EFTUD2Q15029 972 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDC27-219ENST00000576484 E2F5Q15329 346 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 HLA-BQ31612 363 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 TXNRD3NBQ6F5E7 133 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 FAM166AQ6J272 317 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 BTNL8Q6UX41 500 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 SLC24A5Q71RS6 500 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 SPATA21Q7Z572 469 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 TIGD4Q8IY51 512 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 RCOR2Q8IZ40 523 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 OR6S1Q8NH40 331 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 WBP2Q969T9 261 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 POM121L2Q96KW2 1035 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 GDAP1L1Q96MZ0 367 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 CDCA3Q99618 268 aaPredicted RBP4.27□□□□□ -1.73
CDC27-219ENST00000576484 DGCR6LQ9BY27 220 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 RIMS4Q9H426 269 aaPredicted RBP4.27□□□□□ -1.73
CDC27-219ENST00000576484 PKD2L2Q9NZM6 624 aa4.27□□□□□ -1.73
CDC27-219ENST00000576484 H0YAE9 185 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 PPIP5K2O43314 1243 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 NXPH2O95156 264 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 PGLSO95336 258 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 SIX3O95343 332 aaPredicted RBP4.26□□□□□ -1.73
CDC27-219ENST00000576484 DUTP33316 252 aaKnown RBP4.26□□□□□ -1.73
CDC27-219ENST00000576484 MTF1Q14872 753 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 MPP7Q5T2T1 576 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 BSPRYQ5W0U4 402 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 FBXL22Q6P050 247 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 CYB5D1Q6P9G0 228 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 SHQ1Q6PI26 577 aaKnown RBP4.26□□□□□ -1.73
CDC27-219ENST00000576484 CPEB2Q7Z5Q1 589 aaKnown RBP4.26□□□□□ -1.73
CDC27-219ENST00000576484 PIGWQ7Z7B1 504 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 GLRX5Q86SX6 157 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 CATSPERDQ86XM0 798 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 CCDC63Q8NA47 563 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 MAPK15Q8TD08 544 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 EXOC4Q96A65 974 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 C2orf48Q96LS8 159 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 BTBD9Q96Q07 612 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 KRT12Q99456 494 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 NYXQ9GZU5 481 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 EGLN3Q9H6Z9 239 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 RAB9BQ9NP90 201 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 ZDHHC18Q9NUE0 388 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 ASIC3Q9UHC3 531 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 PRDM4Q9UKN5 801 aa4.26□□□□□ -1.73
CDC27-219ENST00000576484 C5orf52A6NGY3 159 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 ZNF500O60304 480 aaPredicted RBP4.25□□□□□ -1.73
CDC27-219ENST00000576484 RNF224P0DH78 156 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 GLULP15104 373 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 HOXC13P31276 330 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 TIA1P31483 386 aaKnown RBP eCLIP4.25□□□□□ -1.73
CDC27-219ENST00000576484 SFTPDP35247 375 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 CETN2P41208 172 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 SOX3P41225 446 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 OR3A2P47893 321 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 CDX1P47902 265 aaPredicted RBP4.25□□□□□ -1.73
CDC27-219ENST00000576484 LUMP51884 338 aaPredicted RBP4.25□□□□□ -1.73
CDC27-219ENST00000576484 RBP5P82980 135 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 TRA2AQ13595 282 aaKnown RBP eCLIP4.25□□□□□ -1.73
CDC27-219ENST00000576484 CDH18Q13634 790 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 PTPN14Q15678 1187 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 TTC27Q6P3X3 843 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 NOTUMQ6P988 496 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 PET117Q6UWS5 81 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 FCRLAQ7L513 359 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 GALNTL5Q7Z4T8 443 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 CCDC60Q8IWA6 550 aaPredicted RBP4.25□□□□□ -1.73
CDC27-219ENST00000576484 FAM89BQ8N5H3 189 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 ZNF519Q8TB69 540 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 DEPDC1BQ8WUY9 529 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 CORO2AQ92828 525 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 RBM41Q96IZ5 413 aaKnown RBP4.25□□□□□ -1.73
CDC27-219ENST00000576484 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 ZNF599Q96NL3 588 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 CDK19Q9BWU1 502 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 TDRD1Q9BXT4 1180 aaKnown RBP4.25□□□□□ -1.73
CDC27-219ENST00000576484 RNF121Q9H920 327 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 SPHK2Q9NRA0 654 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 PANK4Q9NVE7 773 aa4.25□□□□□ -1.73
CDC27-219ENST00000576484 IL16Q14005 1332 aa4.24□□□□□ -1.73
CDC27-219ENST00000576484 SNED1Q8TER0 1413 aa4.24□□□□□ -1.73
CDC27-219ENST00000576484 PRSS46E5RG02 174 aa4.24□□□□□ -1.73
CDC27-219ENST00000576484 FLRT2O43155 660 aa4.24□□□□□ -1.73
CDC27-219ENST00000576484 SERPINB2P05120 415 aa4.24□□□□□ -1.73
CDC27-219ENST00000576484 VIMP08670 466 aaKnown RBP4.24□□□□□ -1.73
CDC27-219ENST00000576484 ZSCAN5DPP0CG00 497 aa4.24□□□□□ -1.73
CDC27-219ENST00000576484 PRKAR1AP10644 381 aa4.24□□□□□ -1.73
CDC27-219ENST00000576484 ELAVL4P26378 380 aaKnown RBP4.24□□□□□ -1.73
CDC27-219ENST00000576484 TLX1P31314 330 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms