RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 CLEC18CQ8NCF0 446 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 FBXO36Q8NEA4 188 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 OR9A4Q8NGU2 314 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 MIEF2Q96C03 454 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 MOCOSQ96EN8 888 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 SNF8Q96H20 258 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 IP6K3Q96PC2 410 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 OR4K3Q96R72 315 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 UNKQ9C0B0 810 aaKnown RBP11.3□□□□□ -0.6
LITAF-219ENST00000576334 DPH5Q9H2P9 285 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 PARVBQ9HBI1 364 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 ZNF160Q9HCG1 818 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 CCDC177Q9NQR7 707 aaPredicted RBP11.3□□□□□ -0.6
LITAF-219ENST00000576334 SMYD2Q9NRG4 433 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 UTP6Q9NYH9 597 aaKnown RBP11.3□□□□□ -0.6
LITAF-219ENST00000576334 ANKMY1Q9P2S6 941 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
LITAF-219ENST00000576334 NTNG1Q9Y2I2 539 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 IGLV3-12A0A075B6K2 115 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 ZNF839A8K0R7 811 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 EFCAB8A8MWE9 144 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 CDC7O00311 574 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 DNAJB6O75190 326 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 VPS4BO75351 444 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 KLHL18O94889 574 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 CCNDBP1O95273 360 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 GUCA1CO95843 209 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 B3GALT4O96024 378 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 NPPBP16860 134 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 GMPRP36959 345 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 SLC26A3P40879 764 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 ARL4CP56559 192 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 SOX8P57073 446 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 CSNK1G2P78368 415 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 OCA2Q04671 838 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 C2orf54Q08AI8 447 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 AIMP2Q13155 320 aaKnown RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 EIF2S3LQ2VIR3 472 aaKnown RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 TUBB8Q3ZCM7 444 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 ATG9BQ674R7 924 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 HIST2H2BCQ6DN03 193 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 PRMT9Q6P2P2 845 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 SYDE1Q6ZW31 735 aaPredicted RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 CUZD1Q86UP6 607 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 KCT2Q8NC54 265 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 ZNF740Q8NDX6 193 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 ZCCHC10Q8TBK6 192 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 MCOLN3Q8TDD5 553 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 RERGQ96A58 199 aaPredicted RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 PNPLA2Q96AD5 504 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 TRIM44Q96DX7 344 aaPredicted RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 THOC3Q96J01 351 aaKnown RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 NAT9Q9BTE0 207 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 SPNS1Q9H2V7 528 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 SEMA3GQ9NS98 782 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 ASF1BQ9NVP2 202 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 VPS4AQ9UN37 437 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 G3BP2Q9UN86 482 aaKnown RBP11.29□□□□□ -0.6
LITAF-219ENST00000576334 VWA7Q9Y334 891 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 PCDHGB7Q9Y5F8 929 aa11.29□□□□□ -0.6
LITAF-219ENST00000576334 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
LITAF-219ENST00000576334 IGHV3-20A0A0C4DH32 117 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 CXorf49A8MYA2 514 aaPredicted RBP11.28□□□□□ -0.6
LITAF-219ENST00000576334 IDSB3KWA1 339 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 EIF3FO00303 357 aaPredicted RBP11.28□□□□□ -0.6
LITAF-219ENST00000576334 SEMA7AO75326 666 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 F10P00742 488 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 C8GP07360 202 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 COX6A1P12074 109 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 IL1RNP18510 177 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 PAFAH1B1P43034 410 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 RGS4P49798 205 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 ST13P50502 369 aaKnown RBP11.28□□□□□ -0.6
LITAF-219ENST00000576334 EMP2P54851 167 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 IL2P60568 153 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 ABATP80404 500 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 SRSF11Q05519 484 aaKnown RBP11.28□□□□□ -0.6
LITAF-219ENST00000576334 DSG2Q14126 1118 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 TRADDQ15628 312 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 C18orf21Q32NC0 220 aaPredicted RBP11.28□□□□□ -0.6
LITAF-219ENST00000576334 CATSPEREQ5SY80 951 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 UGT3A1Q6NUS8 523 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 LINC00696Q6ZRV3 163 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 KIAA0408Q6ZU52 694 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 STRA8Q7Z7C7 330 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 SLC26A11Q86WA9 606 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 ZC3HC1Q86WB0 502 aaKnown RBP11.28□□□□□ -0.6
LITAF-219ENST00000576334 ATCAYQ86WG3 371 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 PDSS2Q86YH6 399 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 CEP97Q8IW35 865 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 ZC3H7AQ8IWR0 971 aaKnown RBP11.28□□□□□ -0.6
LITAF-219ENST00000576334 ZBED8Q8IZ13 594 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 CATSPER1Q8NEC5 780 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 ANKRD49Q8WVL7 239 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 SGPP1Q9BX95 441 aa11.28□□□□□ -0.6
LITAF-219ENST00000576334 DRC3Q9H069 523 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms