RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CUTCQ9NTM9 273 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 IFT80Q9P2H3 777 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 PSMC3IPQ9P2W1 217 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 CTNNAL1Q9UBT7 734 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 GPN3Q9UHW5 284 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 SH2B3Q9UQQ2 575 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 FER1L5A0AVI2 2057 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 IQANK1A0A1B0GTG1 560 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 A0A1B0GX78 115 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 H0YGG7 62 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 SRPX2O60687 465 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-216ENST00000575599 CDH16O75309 829 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 SASH3O75995 380 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 KRT38O76015 456 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 CAPN1P07384 714 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 RAB40ALP0C0E4 278 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 CCDC166P0CW27 439 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 EZRP15311 586 aaKnown RBP12.67□□□□□ -0.38
RPAIN-216ENST00000575599 CCND1P24385 295 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 CCR10P46092 362 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 SERPINB9P50453 376 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 RAB10P61026 200 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 ARF3P61204 181 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-216ENST00000575599 TSNQ15631 228 aaKnown RBP12.67□□□□□ -0.38
RPAIN-216ENST00000575599 PPP1R3AQ16821 1122 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 CRTC2Q53ET0 693 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-216ENST00000575599 RAPH1Q70E73 1250 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 CMC1Q7Z7K0 106 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 ADAMTSL2Q86TH1 951 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 C17orf64Q86WR6 236 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 ATL1Q8WXF7 558 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 RERGQ96A58 199 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-216ENST00000575599 FBXL8Q96CD0 374 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 WBP1Q96G27 269 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 ZNF285Q96NJ3 590 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 EGFL8Q99944 293 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 C17orf62Q9BQA9 187 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 SGPP1Q9BX95 441 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 SEMA4CQ9C0C4 833 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 SYNPO2LQ9H987 977 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 TBK1Q9UHD2 729 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 TCFL5Q9UL49 500 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 NOVA2Q9UNW9 492 aaKnown RBP12.67□□□□□ -0.38
RPAIN-216ENST00000575599 POLHQ9Y253 713 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 PADI2Q9Y2J8 665 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 HEATR5BQ9P2D3 2071 aa12.67□□□□□ -0.38
RPAIN-216ENST00000575599 CACNA1GO43497 2377 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 SMG1Q96Q15 3661 aaKnown RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 HYKKA2RU49 373 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 FITM1A5D6W6 292 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 NCF1BA6NI72 391 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 NCF1CA8MVU1 366 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 DSCR3O14972 297 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 WISP3O95389 354 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 STATHP02808 62 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 CDH1P12830 882 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 NCF1P14598 390 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 KRT15P19012 456 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 GMPRP36959 345 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 GCGRP47871 477 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 POLE2P56282 527 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 BMPR2Q13873 1038 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 CSHL1Q14406 222 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 ZKSCAN8Q15776 578 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 UGT8Q16880 541 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 ZXDCQ2QGD7 858 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 FAM214AQ32MH5 1076 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 NKAIN1Q4KMZ8 207 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 YOD1Q5VVQ6 348 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 LCTLQ6UWM7 567 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 TDRPQ86YL5 185 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 DTWD1Q8N5C7 304 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 CSNK1A1LQ8N752 337 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 EXD3Q8N9H8 876 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 LSM14AQ8ND56 463 aaKnown RBP12.66□□□□□ -0.38
RPAIN-216ENST00000575599 OR56A3Q8NH54 315 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 SLC44A1Q8WWI5 657 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 CABS1Q96KC9 395 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 HAUS8Q9BT25 410 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 DERL2Q9GZP9 239 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 MAN2B2Q9Y2E5 1009 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 OARD1Q9Y530 152 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 MAU2Q9Y6X3 613 aa12.66□□□□□ -0.38
RPAIN-216ENST00000575599 ATMQ13315 3056 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 MED26O95402 600 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 ANXA5P08758 320 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 CD1DP15813 335 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 ITGAXP20702 1163 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 HRH2P25021 359 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 CNTFP26441 200 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 FOXL2P58012 376 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 HKDC1Q2TB90 917 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 MROH9Q5TGP6 573 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.65□□□□□ -0.38
RPAIN-216ENST00000575599 APOBEC4Q8WW27 367 aaKnown RBP12.65□□□□□ -0.38
RPAIN-216ENST00000575599 EXT2Q93063 718 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 MTBPQ96DY7 904 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 C10orf90Q96M02 699 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 TSNARE1Q96NA8 513 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 OR2A5Q96R48 311 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms