RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 NAA20P61599 178 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 RELAQ04206 551 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 LAPTM5Q13571 262 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 SLBPQ14493 270 aaKnown RBP eCLIP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 RTP5Q14D33 572 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 UNC50Q53HI1 259 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 TCTE1Q5JU00 501 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 ZNF678Q5SXM1 525 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 HHATQ5VTY9 493 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 LIPMQ5VYY2 423 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 ATG9BQ674R7 924 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 FBXO42Q6P3S6 717 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 SLCO4C1Q6ZQN7 724 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 RNF44Q7L0R7 432 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 TMEM126BQ8IUX1 230 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 C10orf107Q8IVU9 208 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 OR4K1Q8NGD4 311 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 OR1L3Q8NH93 324 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 THAP11Q96EK4 314 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 PTCD3Q96EY7 689 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 SLC46A1Q96NT5 459 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 FCRL4Q96PJ5 515 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 TMEM237Q96Q45 408 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 PAIP2Q9BPZ3 127 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 EFCAB11Q9BUY7 163 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 DDA1Q9BW61 102 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 NLNQ9BYT8 704 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 DRC3Q9H069 523 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 EHD1Q9H4M9 534 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 NOL11Q9H8H0 719 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 OXSMQ9NWU1 459 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 NKIRAS1Q9NYS0 192 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 PCTPQ9UKL6 214 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 B3GALT1Q9Y5Z6 326 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 SCN2AQ99250 2005 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 CCDC88CQ9P219 2028 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 TRBC2A0A5B9 178 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 TMEM120BA0PK00 339 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 HMGB1P1B2RPK0 211 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 H0YGG7 62 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 HCRTR1O43613 425 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 BRINP1O60477 761 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 TRIM13O60858 407 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 SERPIND1P05546 499 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 MSL3P1P0C860 447 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 GABRA4P48169 554 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 DNAJB13P59910 316 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 ARF3P61204 181 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 REEP5Q00765 189 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 CLCQ05315 142 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 DOC2AQ14183 400 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 PCLAFQ15004 111 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 HSP90B2PQ58FF3 399 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 WASHC2DQ5SRD0 308 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 NUDCD3Q8IVD9 361 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 ZNF655Q8N720 491 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 TTC29Q8NA56 475 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 PPP1R14CQ8TAE6 165 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 TRPC4APQ8TEL6 797 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 UBE2E3Q969T4 207 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 L3HYPDHQ96EM0 354 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 PRR11Q96HE9 360 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 NSUN5Q96P11 429 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 SH3GL2Q99962 352 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 C1QTNF3Q9BXJ4 246 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 SPRTNQ9H040 489 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 ACSS2Q9NR19 701 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 THSD1Q9NS62 852 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 ZNF446Q9NWS9 450 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 GEMIN8Q9NWZ8 242 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 PILRAQ9UKJ1 303 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 PCDHGA3Q9Y5H0 932 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 AHCTF1Q8WYP5 2266 aa13.89□□□□□ -0.19
NPLOC4-218ENST00000574964 LOC105369274A0A096LPK9 316 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 LOC102723532A0A0G2JNH3 316 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 WDR91A4D1P6 747 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 TXNDC9O14530 226 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 DYNC1I1O14576 645 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 NVLO15381 856 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 SCRG1O75711 98 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 CLDN9O95484 217 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 OTCP00480 354 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 TSPAN8P19075 237 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 ALDH3A1P30838 453 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 SLC5A2P31639 672 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 HPDP32754 393 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 HNF4AP41235 474 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 SERPINB4P48594 390 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 NAGLUP54802 743 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 SHC2P98077 582 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 GPS2Q13227 327 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 GRM7Q14831 915 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 TBCCQ15814 346 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 TTMPQ5BVD1 217 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 LIPJQ5W064 366 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 FRMPD2BQ6IN97 320 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 TLDC1Q6P9B6 456 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 TMIGD1Q6UXZ0 262 aa13.88□□□□□ -0.19
NPLOC4-218ENST00000574964 RPS27LQ71UM5 84 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms