RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	PRICKLE3	O43900	615 aa	Predicted RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	SMIM24	O75264	130 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	PSIP1	O75475	530 aa	Known RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	CAT	P04040	527 aa	Known RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	BPGM	P07738	259 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	CYP2A7	P20853	494 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	ATP5F1	P24539	256 aa	Predicted RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	RORA	P35398	523 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	MDH1	P40925	334 aa	Known RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	KCNC1	P48547	511 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	SERPINB4	P48594	390 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	AP1S2	P56377	157 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	NAA20	P61599	178 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	CDKL1	Q00532	357 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	LY6D	Q14210	128 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	ARHGAP19	Q14CB8	494 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	OR4D1	Q15615	310 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	TSN	Q15631	228 aa	Known RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	ZIC1	Q15915	447 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	UBE2R2	Q712K3	238 aa	Predicted RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	NUDCD3	Q8IVD9	361 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	GPR135	Q8IZ08	494 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	ZNF843	Q8N446	348 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	DNAJC22	Q8N4W6	341 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	EXD3	Q8N9H8	876 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	SLC38A9	Q8NBW4	561 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	CT55	Q8WUE5	264 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	ZUFSP	Q96AP4	578 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	PAIP2	Q9BPZ3	127 aa	Known RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	FAM60A	Q9NP50	221 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	ENAM	Q9NRM1	1142 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	CPSF2	Q9P2I0	782 aa	Known RBP	13.8	□□□□□ -0.2
ABR-223	ENST00000573895	XPR1	Q9UBH6	696 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	KLK4	Q9Y5K2	254 aa		13.8	□□□□□ -0.2
ABR-223	ENST00000573895	NPEPPSL1	A6NEC2	478 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895		G3V2L1	256 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	POLR3G	O15318	223 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	KLK8	O60259	260 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	H2AFY	O75367	372 aa	Known RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	CREG1	O75629	220 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	S100B	P04271	92 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	PRB1	P04280	392 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	RAB40AL	P0C0E4	278 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	SBK3	P0C264	359 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	ERG	P11308	486 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	PTPN4	P29074	926 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	HSD17B2	P37059	387 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	CCR10	P46092	362 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	DNAJB13	P59910	316 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	RPS15	P62841	145 aa	Known RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	NAA25	Q14CX7	972 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	CYP2A13	Q16696	494 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	METTL2B	Q6P1Q9	378 aa	Known RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	TLDC1	Q6P9B6	456 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	SBSN	Q6UWP8	590 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	FRA10AC1	Q70Z53	315 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	TRIM73	Q86UV7	250 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	TCAIM	Q8N3R3	496 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	LMNTD1	Q8N9Z9	388 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	RAB3IL1	Q8TBN0	382 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	MGARP	Q8TDB4	240 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	DYDC1	Q8WWB3	177 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	N4BP2L2	Q92802	583 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	UNK	Q9C0B0	810 aa	Known RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	SEMA4C	Q9C0C4	833 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	KLHL25	Q9H0H3	589 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	C12orf65	Q9H3J6	166 aa	Known RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	OXSM	Q9NWU1	459 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.79	□□□□□ -0.2
ABR-223	ENST00000573895	NUDT4	Q9NZJ9	180 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	PLCL2	Q9UPR0	1127 aa		13.79	□□□□□ -0.2
ABR-223	ENST00000573895	MYO1C	O00159	1063 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	ZNF749	O43361	778 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	DLX3	O60479	287 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	TRIM13	O60858	407 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	KATNA1	O75449	491 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	OR2B3	O76000	313 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	IPO13	O94829	963 aa	Known RBP	13.78	□□□□□ -0.2
ABR-223	ENST00000573895	ANXA5	P08758	320 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	NEFH	P12036	1026 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	MAG	P20916	626 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	ALDH3A1	P30838	453 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	BDKRB1	P46663	353 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	HNMT	P50135	292 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	ALDH18A1	P54886	795 aa	Known RBP	13.78	□□□□□ -0.2
ABR-223	ENST00000573895	NFKB2	Q00653	900 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	TGFBI	Q15582	683 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	SF1	Q15637	639 aa	Known RBP	13.78	□□□□□ -0.2
ABR-223	ENST00000573895	PPP1R3A	Q16821	1122 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	SULT1C3	Q6IMI6	304 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	RHBDD2	Q6NTF9	364 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	SYVN1	Q86TM6	617 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	TAX1BP1	Q86VP1	789 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	OR9A1P	Q8NGU1	263 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	CKAP2	Q8WWK9	683 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	ATL1	Q8WXF7	558 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	MR1	Q95460	341 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	CLIP3	Q96DZ5	547 aa		13.78	□□□□□ -0.2

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