RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 HECTD1Q9ULT8 2610 aa6.59□□□□□ -1.36
SF3B3-209ENST00000567635 PCNX1Q96RV3 2341 aa6.59□□□□□ -1.36
SF3B3-209ENST00000567635 NAV2Q8IVL1 2488 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 USP9XQ93008 2570 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 IGLV3-12A0A075B6K2 115 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PABPN1LA6NDY0 278 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 E7ESA3 106 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 MASP2O00187 686 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 SOCS6O14544 535 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 TSPAN12O95859 305 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ANXA5P08758 320 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 HOXB1P14653 301 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 NPPBP16860 134 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 FBLP22087 321 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 FDXRP22570 491 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ITGA3P26006 1051 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 SLC26A3P40879 764 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 CD97P48960 835 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 EMP2P54851 167 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 RPS15AP62244 130 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 NAE1Q13564 534 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 FAM53BQ14153 422 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 RBBP7Q16576 425 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 NDUFA9Q16795 377 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 HKDC1Q2TB90 917 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PLEKHN1Q494U1 663 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PRAMEF13Q5VWM6 474 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 DUPD1Q68J44 220 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 CAPN13Q6MZZ7 669 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 FAM45BPQ6NSW5 357 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 AGTRAPQ6RW13 159 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 IGFL3Q6UXB1 125 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 MBOAT1Q6ZNC8 495 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 STRA8Q7Z7C7 330 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 LAPTM4BQ86VI4 370 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 SLC26A11Q86WA9 606 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ZC3HC1Q86WB0 502 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ATCAYQ86WG3 371 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 C17orf64Q86WR6 236 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PLD3Q8IV08 490 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PARP9Q8IXQ6 854 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PRSS58Q8IYP2 241 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ZADH2Q8N4Q0 377 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ARHGEF39Q8N4T4 335 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 RBMXL3Q8N7X1 1067 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 FBXO36Q8NEA4 188 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 OR11G2Q8NGC1 345 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 FAM45AQ8TCE6 357 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 CPT1CQ8TCG5 803 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 STT3BQ8TCJ2 826 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PYROXD1Q8WU10 500 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ATL1Q8WXF7 558 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PNPLA2Q96AD5 504 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 MIB2Q96AX9 1013 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ALKBH8Q96BT7 664 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 THAP11Q96EK4 314 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 MMABQ96EY8 250 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PDLIM5Q96HC4 596 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 C10orf90Q96M02 699 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 SPSB2Q99619 263 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 WDR83Q9BRX9 315 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ERP44Q9BS26 406 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 HAUS8Q9BT25 410 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 CRB3Q9BUF7 120 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 SGPP1Q9BX95 441 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 FAM129AQ9BZQ8 928 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 DRC3Q9H069 523 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ATG10Q9H0Y0 220 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF552Q9H707 407 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 SYNPO2LQ9H987 977 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 SLAMF7Q9NQ25 335 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 CUEDC1Q9NWM3 386 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ARL15Q9NXU5 204 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 MOCS1Q9NZB8 636 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 WHRNQ9P202 907 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 ZFATQ9P243 1243 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 SLC17A6Q9P2U8 582 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 TRPC4Q9UBN4 977 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 C3orf18Q9UK00 162 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 RUVBL1Q9Y265 456 aaKnown RBP6.58□□□□□ -1.36
SF3B3-209ENST00000567635 PSAT1Q9Y617 370 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 HS3ST3B1Q9Y662 390 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 CACNA1DQ01668 2161 aa6.58□□□□□ -1.36
SF3B3-209ENST00000567635 CROCCQ5TZA2 2017 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 USP9YO00507 2555 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 A0A0A6YYC8 382 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 I3L1I5 382 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 FANCGO15287 622 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 EIF3HO15372 352 aaKnown RBP eCLIP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 FOXS1O43638 330 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 LCMT2O60294 686 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 ALOX12BO75342 701 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 VPS4BO75351 444 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 HEXBP07686 556 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 ENO2P09104 434 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 CDH1P12830 882 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 SAT1P21673 171 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 CXCR2P25025 360 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 GRK3P35626 688 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms