RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
RNF40-211ENST00000567365 FAM117AQ9C073 453 aa11.86□□□□□ -0.51
RNF40-211ENST00000567365 VPS11Q9H270 941 aa11.86□□□□□ -0.51
RNF40-211ENST00000567365 SLC22A11Q9NSA0 550 aa11.86□□□□□ -0.51
RNF40-211ENST00000567365 IL17BQ9UHF5 180 aa11.86□□□□□ -0.51
RNF40-211ENST00000567365 RNF112Q9ULX5 631 aa11.86□□□□□ -0.51
RNF40-211ENST00000567365 SRPK3Q9UPE1 567 aa11.86□□□□□ -0.51
RNF40-211ENST00000567365 PCDHGA4Q9Y5G9 962 aa11.86□□□□□ -0.51
RNF40-211ENST00000567365 IQANK1A0A1B0GTG1 560 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 PABPN1LA6NDY0 278 aaKnown RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 NCF1BA6NI72 391 aaPredicted RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 NCF1CA8MVU1 366 aaPredicted RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 TUBBP07437 444 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 HBQ1P09105 142 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 NCF1P14598 390 aaPredicted RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 HSPA7P48741 367 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 AGTR2P50052 363 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 UCNP55089 124 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 RPS15AP62244 130 aaKnown RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 SNRPNP63162 240 aaKnown RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 GRM7Q14831 915 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 CRTC2Q53ET0 693 aaPredicted RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 FBXO48Q5FWF7 155 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 MANEAQ5SRI9 462 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 CATSPEREQ5SY80 951 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 NXPE4Q6UWF7 544 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 SLCO4C1Q6ZQN7 724 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 IL22RA1Q8N6P7 574 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 ZNF740Q8NDX6 193 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 CT55Q8WUE5 264 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 ALKBH8Q96BT7 664 aaKnown RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 THAP11Q96EK4 314 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 WDR34Q96EX3 536 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 CABS1Q96KC9 395 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 RUFY1Q96T51 708 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 DPH2Q9BQC3 489 aaPredicted RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 CCDC77Q9BR77 488 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 CD244Q9BZW8 370 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 CHST8Q9H2A9 424 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 PELI2Q9HAT8 420 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 CPNE5Q9HCH3 593 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 STARD5Q9NSY2 213 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 ABCF3Q9NUQ8 709 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 GPRC5BQ9NZH0 403 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 CD274Q9NZQ7 290 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 XPR1Q9UBH6 696 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 DHCR7Q9UBM7 475 aaKnown RBP11.85□□□□□ -0.51
RNF40-211ENST00000567365 CROTQ9UKG9 612 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 KCNE2Q9Y6J6 123 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 BOD1L1Q8NFC6 3051 aa11.85□□□□□ -0.51
RNF40-211ENST00000567365 A0A1W2PPM1 405 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 TRBC2A0A5B9 178 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 SYCE1LA8MT33 242 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 C21orf140B9A014 251 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 CDH16O75309 829 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 STK16O75716 305 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 WDR47O94967 919 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 RECKO95980 971 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 BCL6P41182 706 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 SCTRP47872 440 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 CCR8P51685 355 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 ARSFP54793 590 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 REEP5Q00765 189 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 CDC16Q13042 620 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 DNASE1L3Q13609 305 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 SETDB1Q15047 1291 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 TSNAXIP1Q2TAA8 658 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 HKDC1Q2TB90 917 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 FAM199XQ6PEV8 388 aaPredicted RBP11.84□□□□□ -0.51
RNF40-211ENST00000567365 COX15Q7KZN9 410 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 LCA5Q86VQ0 697 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 DTWD1Q8N5C7 304 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 MFSD9Q8NBP5 474 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 OR2W6PQ8NHA6 318 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 EPS8L3Q8TE67 593 aaKnown RBP11.84□□□□□ -0.51
RNF40-211ENST00000567365 TSNARE1Q96NA8 513 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 TMEM109Q9BVC6 243 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 EHD1Q9H4M9 534 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 CNOT10Q9H9A5 744 aaKnown RBP11.84□□□□□ -0.51
RNF40-211ENST00000567365 DNAJC11Q9NVH1 559 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 WWOXQ9NZC7 414 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 RUVBL1Q9Y265 456 aaKnown RBP11.84□□□□□ -0.51
RNF40-211ENST00000567365 KALRNO60229 2985 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 CCDC88CQ9P219 2028 aa11.84□□□□□ -0.51
RNF40-211ENST00000567365 FASNP49327 2511 aaKnown RBP11.83□□□□□ -0.52
RNF40-211ENST00000567365 A0A1B0GX78 115 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 FEZF1A0PJY2 475 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 HYKKA2RU49 373 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 FOXO6A8MYZ6 492 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 K7EPI3 171 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 TK2O00142 265 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 DSCR3O14972 297 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 CNOT3O75175 753 aaKnown RBP11.83□□□□□ -0.52
RNF40-211ENST00000567365 KLF7O75840 302 aaPredicted RBP11.83□□□□□ -0.52
RNF40-211ENST00000567365 WFS1O76024 890 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 TBX6O95947 436 aaPredicted RBP11.83□□□□□ -0.52
RNF40-211ENST00000567365 RBP1P09455 135 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 RAB40ALP0C0E4 278 aa11.83□□□□□ -0.52
RNF40-211ENST00000567365 CCNYL3P0C7X3 344 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms