RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 NOVA2Q9UNW9 492 aaKnown RBP19.17■□□□□ 0.66
CLN6-207ENST00000566347 ICE1Q9Y2F5 2266 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 KCNE1BA0A087WTH5 132 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 A0A0A6YYC8 382 aaPredicted RBP19.16■□□□□ 0.66
CLN6-207ENST00000566347 NSG1A0A0A6YYJ2 146 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 A0A1W2PQ72 361 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 I3L1I5 382 aaPredicted RBP19.16■□□□□ 0.66
CLN6-207ENST00000566347 SLC16A5O15375 505 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 P2RX6O15547 441 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 SEMA7AO75326 666 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 CBX6O95503 412 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 HEXBP07686 556 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 FDXRP22570 491 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 CCND1P24385 295 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 AVPR1BP47901 424 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 RPS15AP62244 130 aaKnown RBP19.16■□□□□ 0.66
CLN6-207ENST00000566347 TIAL1Q01085 375 aaKnown RBP eCLIP19.16■□□□□ 0.66
CLN6-207ENST00000566347 Q0VFX4 171 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 B3GNTL1Q67FW5 361 aaPredicted RBP19.16■□□□□ 0.66
CLN6-207ENST00000566347 GALNT7Q86SF2 657 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 SPNS2Q8IVW8 549 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 PRR7Q8TB68 274 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 C8orf44Q96CB5 159 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 THAP11Q96EK4 314 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 CERS2Q96G23 380 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 LMF1Q96S06 567 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 BARD1Q99728 777 aaKnown RBP19.16■□□□□ 0.66
CLN6-207ENST00000566347 AGPAT4Q9NRZ5 378 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 PDE10AQ9Y233 779 aa19.16■□□□□ 0.66
CLN6-207ENST00000566347 FOXS1O43638 330 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 BANF1O75531 89 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 DDAH2O95865 285 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 COX6A1P12074 109 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 TSFMP43897 325 aaKnown RBP19.15■□□□□ 0.66
CLN6-207ENST00000566347 MFAP5Q13361 173 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 ELOAQ14241 798 aaKnown RBP19.15■□□□□ 0.66
CLN6-207ENST00000566347 MORF4L2Q15014 288 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 TLR1Q15399 786 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 BBS9Q3SYG4 887 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 MSS51Q4VC12 460 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 PAQR3Q6TCH7 311 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 SYDE1Q6ZW31 735 aaPredicted RBP19.15■□□□□ 0.66
CLN6-207ENST00000566347 PLD3Q8IV08 490 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 PDIK1LQ8N165 341 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 RUNDC3BQ96NL0 473 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 MESP1Q9BRJ9 268 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 ADAMTS6Q9UKP5 1117 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 CSAG2Q9Y5P2 127 aa19.15■□□□□ 0.66
CLN6-207ENST00000566347 PABPN1LA6NDY0 278 aaKnown RBP19.14■□□□□ 0.65
CLN6-207ENST00000566347 ANKUB1A6NFN9 424 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 H0YIG0 161 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 FFAR3O14843 346 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 GPR42O15529 346 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 AHSGP02765 367 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 HIST1H2AGP0C0S8 130 aaPredicted RBP19.14■□□□□ 0.65
CLN6-207ENST00000566347 HIST1H2ADP20671 130 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 GABRB3P28472 473 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 CDKN2DP55273 166 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 AP2B1P63010 937 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 ZNF169Q14929 603 aaPredicted RBP19.14■□□□□ 0.65
CLN6-207ENST00000566347 RBM20Q5T481 1227 aaKnown RBP19.14■□□□□ 0.65
CLN6-207ENST00000566347 AGTRAPQ6RW13 159 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 LINC00696Q6ZRV3 163 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 C17orf64Q86WR6 236 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 LINGO1Q96FE5 620 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 HIST1H2AHQ96KK5 128 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 CNDP1Q96KN2 507 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 HIST1H2AJQ99878 128 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 H2AFJQ9BTM1 129 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 FAM129AQ9BZQ8 928 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 KCNF1Q9H3M0 494 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 PPANQ9NQ55 473 aaKnown RBP19.14■□□□□ 0.65
CLN6-207ENST00000566347 RIC8BQ9NVN3 520 aa19.14■□□□□ 0.65
CLN6-207ENST00000566347 CORO1CQ9ULV4 474 aaPredicted RBP19.14■□□□□ 0.65
CLN6-207ENST00000566347 LOC102723996A0A087X1L8 192 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 IGHV1-45A0A0A0MS14 117 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 NSA2O95478 260 aaKnown RBP19.13■□□□□ 0.65
CLN6-207ENST00000566347 SERPINA7P05543 415 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 PRR35P0CG20 571 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 IVDP26440 423 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 GRK3P35626 688 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 IL2P60568 153 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 CSNK1G2P78368 415 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 EEF1A2Q05639 463 aaKnown RBP19.13■□□□□ 0.65
CLN6-207ENST00000566347 CDC16Q13042 620 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 RIPOR1Q6ZS17 1223 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 VN1R4Q7Z5H5 301 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 ZC3H7AQ8IWR0 971 aaKnown RBP19.13■□□□□ 0.65
CLN6-207ENST00000566347 CAMKVQ8NCB2 501 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 LRRC39Q96DD0 335 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 SGPP1Q9BX95 441 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 ATG10Q9H0Y0 220 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 MKL2Q9ULH7 1088 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 NTNG1Q9Y2I2 539 aa19.13■□□□□ 0.65
CLN6-207ENST00000566347 KLHL18O94889 574 aa19.12■□□□□ 0.65
CLN6-207ENST00000566347 CYC1P08574 325 aa19.12■□□□□ 0.65
CLN6-207ENST00000566347 PDAP1Q13442 181 aaKnown RBP19.12■□□□□ 0.65
CLN6-207ENST00000566347 NAE1Q13564 534 aa19.12■□□□□ 0.65
CLN6-207ENST00000566347 TEDDM1Q5T9Z0 273 aa19.12■□□□□ 0.65
CLN6-207ENST00000566347 FAAH2Q6GMR7 532 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms