RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SIX3O95343 332 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-206ENST00000565990 ZBTB11O95625 1053 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-206ENST00000565990 MYL2P10916 166 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 NEFHP12036 1026 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 ST6GAL1P15907 406 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 ACADSP16219 412 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 CDH3P22223 829 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 CMPK1P30085 196 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 ID4P47928 161 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 CLNS1AP54105 237 aaKnown RBP12.12□□□□□ -0.47
SF3B3-206ENST00000565990 INHBCP55103 352 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 NAA20P61599 178 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 HERVK_113P63132 956 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 HSD11B2P80365 405 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 OCRLQ01968 901 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 NAA25Q14CX7 972 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 ZIC1Q15915 447 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 UNC50Q53HI1 259 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 CCDC157Q569K6 752 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 ZNF678Q5SXM1 525 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 HES3Q5TGS1 186 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 PRAMEF9Q5VWM5 478 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 FIGLAQ6QHK4 219 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 LRRC70Q7Z2Q7 622 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 MTDHQ86UE4 582 aaKnown RBP12.12□□□□□ -0.47
SF3B3-206ENST00000565990 FAM129CQ86XR2 697 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 CRLF3Q8IUI8 442 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 FAM20CQ8IXL6 584 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 GALNT15Q8N3T1 639 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 D2HGDHQ8N465 521 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 DNAJC22Q8N4W6 341 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 EXT2Q93063 718 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 NEIL2Q969S2 332 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 TCTN2Q96GX1 697 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 CCDC74BQ96LY2 380 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 DEPDC7Q96QD5 511 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 DPH7Q9BTV6 452 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 SARGQ9BW04 601 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 TMEM120AQ9BXJ8 343 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 ERVK-6Q9BXR3 956 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 EHD1Q9H4M9 534 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 KCNK13Q9HB14 408 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 MRPS30Q9NP92 439 aaKnown RBP12.12□□□□□ -0.47
SF3B3-206ENST00000565990 DNAJC11Q9NVH1 559 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 WWOXQ9NZC7 414 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 HEY2Q9UBP5 337 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 MID2Q9UJV3 735 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 WASF3Q9UPY6 502 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 SH2B3Q9UQQ2 575 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 OR2A25A4D2G3 310 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 LRRC14BA6NHZ5 514 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 A8MU76 341 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 GSC2O15499 205 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 PRAMEF10O60809 474 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 DIAPH2O60879 1101 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 H2AFYO75367 372 aaKnown RBP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 CSO75390 466 aaKnown RBP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 BPGMP07738 259 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 RPS17P08708 135 aaKnown RBP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 ESRRAP11474 423 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 JUPP14923 745 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 EPB42P16452 691 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 GRK2P25098 689 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 GABRA4P48169 554 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 HK2P52789 917 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 MRPS35P82673 323 aaKnown RBP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 CDC16Q13042 620 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 TARDBPQ13148 414 aaKnown RBP eCLIP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 PCLAFQ15004 111 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 FBXO48Q5FWF7 155 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 THEMIS2Q5TEJ8 643 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 C6orf163Q5TEZ5 329 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 ATG9BQ674R7 924 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 NXPE4Q6UWF7 544 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 SLCO4C1Q6ZQN7 724 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 PAQR7Q86WK9 346 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 C17orf64Q86WR6 236 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 BMPERQ8N8U9 685 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 ZNF483Q8TF39 744 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 SLC5A11Q8WWX8 675 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 MIEF2Q96C03 454 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 LIN37Q96GY3 246 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 ACAT2Q9BWD1 397 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 FAM60AQ9NP50 221 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 SLC6A20Q9NP91 592 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.11□□□□□ -0.47
SF3B3-206ENST00000565990 THAP1Q9NVV9 213 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 OPTCQ9UBM4 332 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 KLHL3Q9UH77 587 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 PCTPQ9UKL6 214 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 L3MBTL1Q9Y468 752 aa12.11□□□□□ -0.47
SF3B3-206ENST00000565990 KCNE1BA0A087WTH5 132 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 H7BY64 318 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 OR7A17O14581 309 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 CCNT2O60583 730 aaKnown RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 TRIM13O60858 407 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 SERPINA6P08185 405 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 C1GALT1C1LP0DN25 315 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 PVRP15151 417 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms