RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PELI2Q9HAT8 420 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 KCNK4Q9NYG8 393 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 DKK4Q9UBT3 224 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 APOBEC2Q9Y235 224 aaKnown RBP10.67□□□□□ -0.7
SF3B3-205ENST00000564899 BTRCQ9Y297 605 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 DNAJC15Q9Y5T4 150 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 RNF215Q9Y6U7 377 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 ANKRD12Q6UB98 2062 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 OR5K3A6NET4 321 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 C2orf74A8MZ97 194 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 TRIM38O00635 465 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PIP5K1BO14986 540 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 TLX3O43711 291 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 RRP9O43818 475 aaKnown RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PRICKLE3O43900 615 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PCDHGA12O60330 932 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 DIAPH2O60879 1101 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 WFS1O76024 890 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 UBXN7O94888 489 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 KRT6AP02538 564 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 KRT6BP04259 564 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 JUNP05412 331 aaKnown RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 C1GALT1C1LP0DN25 315 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 JUPP14923 745 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 UGT2B7P16662 529 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 CD22P20273 847 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 CMPK1P30085 196 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 HNF4AP41235 474 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 CASP2P42575 452 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 KRT6CP48668 564 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PPM1FP49593 454 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 IDH3AP50213 366 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 HTR6P50406 440 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 CCR8P51685 355 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 INHBCP55103 352 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ABATP80404 500 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PRDX1Q06830 199 aaKnown RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 SLBPQ14493 270 aaKnown RBP eCLIP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 NR0B2Q15466 257 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 SF1Q15637 639 aaKnown RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ZRSR2Q15696 482 aaKnown RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 UGT3A2Q3SY77 523 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 SLC9B1Q4ZJI4 515 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 CCDC157Q569K6 752 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PAGE2BQ5JRK9 111 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ARMC6Q6NXE6 501 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 KLHL35Q6PF15 583 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 EPGNQ6UW88 154 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ADCK2Q7Z695 626 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 HOMEZQ8IX15 550 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 DDIASQ8IXT1 998 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 CACNA2D3Q8IZS8 1091 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 OR2L3Q8NG85 312 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 SLC39A7Q92504 469 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 CCT6BQ92526 530 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 RSC1A1Q92681 617 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 C19orf60Q96EN9 201 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 WDR34Q96EX3 536 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PRR11Q96HE9 360 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 SEC16BQ96JE7 1060 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PPP1R36Q96LQ0 422 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 EBF4Q9BQW3 602 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 TWSG1Q9GZX9 223 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ELOVL6Q9H5J4 265 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 KCNK13Q9HB14 408 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 MRPS30Q9NP92 439 aaKnown RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 PFDN4Q9NQP4 134 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 CUEDC1Q9NWM3 386 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 HRASLS2Q9NWW9 162 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ACTR10Q9NZ32 417 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-205ENST00000564899 LRIT1Q9P2V4 623 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 SNX6Q9UNH7 406 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ARL2BPQ9Y2Y0 163 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 ENTPD2Q9Y5L3 495 aa10.66□□□□□ -0.7
SF3B3-205ENST00000564899 SPTA1P02549 2419 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 TP53BP1Q12888 1972 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-205ENST00000564899 MANBAO00462 879 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 SDHDO14521 159 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 SIGLEC6O43699 453 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 NUDT21O43809 227 aaKnown RBP10.65□□□□□ -0.7
SF3B3-205ENST00000564899 MYF5P13349 255 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 GLB1P16278 677 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 TYRP1P17643 537 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 AMD1P17707 334 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 CAPZBP47756 277 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 EPHA4P54764 986 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 YBX1P67809 324 aaKnown RBP10.65□□□□□ -0.7
SF3B3-205ENST00000564899 IFT88Q13099 833 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 LAPTM5Q13571 262 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 E2F2Q14209 437 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 HIST2H2ACQ16777 129 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-205ENST00000564899 SGO1Q5FBB7 561 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 HIST2H2AA3Q6FI13 130 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 SCIMPQ6UWF3 145 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 DHRS13Q6UX07 377 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 DBX2Q6ZNG2 339 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 ACAD11Q709F0 780 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 TRIM73Q86UV7 250 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 FAM20CQ8IXL6 584 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms