RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 TMEM98Q9Y2Y6 226 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TMEM14AQ9Y6G1 99 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 H3BQ06 376 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 EIF1AYO14602 144 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 CLDN11O75508 207 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 NTN1O95631 604 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ATP5A1P25705 553 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 MLLT3P42568 568 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 EIF1AXP47813 144 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 RPL34P49207 117 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 TEAD2Q15562 447 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TMEM215Q68D42 235 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SLC24A5Q71RS6 500 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SLC41A3Q96GZ6 507 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 RMI1Q9H9A7 625 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.26□□□□□ -1.89
CHD9-213ENST00000564845 CFAP97Q9P2B7 532 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DKK3Q9UBP4 350 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DNMT3LQ9UJW3 386 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DCHS2Q6V1P9 2916 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 A0A1B0GVG6 124 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 HSPB2A8KAH6 182 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 CENPBD1B2RD01 187 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 FOXE1O00358 373 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 DAB1O75553 588 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GLUD1P00367 558 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 PRNPP04156 253 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 HOXB9P17482 250 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 LAG3P18627 525 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 IDH3AP50213 366 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 IST1P53990 364 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 WNT3AP56704 352 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ACTA2P62736 377 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ACTG2P63267 376 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 HSPA14Q0VDF9 509 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 PTGR1Q14914 329 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 HSPB2Q16082 182 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TEX44Q53QW1 395 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 WDR53Q7Z5U6 358 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 CLNKQ7Z7G1 428 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TMEFF1Q8IYR6 380 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SPARTQ8N0X7 666 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 PNLDC1Q8NA58 520 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 HJURPQ8NCD3 748 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 OR56A4Q8NGH8 313 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 BTN2A2Q8WVV5 523 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 HHIPL1Q96JK4 782 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SPATA13Q96N96 652 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ZNF570Q96NI8 536 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DSN1Q9H410 356 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 LIN28AQ9H9Z2 209 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 CLIC5Q9NZA1 410 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 H7C1Q1 480 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SERPIND1P05546 499 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GPIP06744 558 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 CA3P07451 260 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 MOGQ16653 247 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ACSBG2Q5FVE4 666 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 CCSAPQ6IQ19 270 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 SLC26A9Q7LBE3 791 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SATL1Q86VE3 508 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SVOPLQ8N434 492 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ZNF347Q96SE7 839 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 EPYCQ99645 322 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 POPDC3Q9HBV1 291 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 COQ3Q9NZJ6 369 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SARDHQ9UL12 918 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GIT1Q9Y2X7 761 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ILVBLA1L0T0 632 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DPPA5A6NC42 116 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 NUAK1O60285 661 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TPST2O60704 377 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 RNGTTO60942 597 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 RSL1D1O76021 490 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 CLTBP09497 229 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DLDP09622 509 aaKnown RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 SLC35G6P0C7Q6 338 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 TFEBP19484 476 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 FASP25445 335 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 PREPP48147 710 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DGKQP52824 942 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 MVKQ03426 396 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GALNT1Q10472 559 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 FGFBP1Q14512 234 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DSC3Q14574 896 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GRIN2CQ14957 1233 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 SPIN4Q56A73 249 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 C2orf27AQ580R0 203 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 LRRC66Q68CR7 880 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 ZFP41Q8N8Y5 198 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 LENG8Q96PV6 779 aaPredicted RBP3.26□□□□□ -1.89
CHD9-213ENST00000564845 TSC22D3Q99576 134 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 KXD1Q9BQD3 176 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 EBPLQ9BY08 206 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 FSCN3Q9NQT6 498 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 BTBD3Q9Y2F9 522 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 DTNAQ9Y4J8 743 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 OR1A2Q9Y585 309 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 EI24O14681 340 aa3.26□□□□□ -1.89
CHD9-213ENST00000564845 GRM6O15303 877 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms