RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CXCR2P25025 360 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 VARSP26640 1264 aaKnown RBP16.8■□□□□ 0.28
NME3-205ENST00000563854 EMP3P54852 163 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 Q0VFX4 171 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 SP140Q13342 867 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 NAE1Q13564 534 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 MORF4L2Q15014 288 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 NR6A1Q15406 480 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 NDUFA9Q16795 377 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 PHKG1Q16816 387 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 EIF2S3LQ2VIR3 472 aaKnown RBP16.8■□□□□ 0.28
NME3-205ENST00000563854 GARNL3Q5VVW2 1013 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 TRMT10BQ6PF06 316 aaKnown RBP16.8■□□□□ 0.28
NME3-205ENST00000563854 AGTRAPQ6RW13 159 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 LINC00696Q6ZRV3 163 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 CUZD1Q86UP6 607 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 ANKMY2Q8IV38 441 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 AMER3Q8N944 861 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 PRR7Q8TB68 274 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 CCDC138Q96M89 665 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 NAPGQ99747 312 aaPredicted RBP16.8■□□□□ 0.28
NME3-205ENST00000563854 MACROD1Q9BQ69 325 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 EPS8L2Q9H6S3 715 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 PARVBQ9HBI1 364 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 LRRC4CQ9HCJ2 640 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 TMEM184CQ9NVA4 438 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 C14orf105Q9NVL8 296 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 SH2B3Q9UQQ2 575 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 MRPS2Q9Y399 296 aaKnown RBP16.8■□□□□ 0.28
NME3-205ENST00000563854 SHANK1Q9Y566 2161 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 NSG1A0A0A6YYJ2 146 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 FEZF1A0PJY2 475 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 TTI1O43156 1089 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 FOXS1O43638 330 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 HIST1H2AGP0C0S8 130 aaPredicted RBP16.79■□□□□ 0.28
NME3-205ENST00000563854 HIST1H2ADP20671 130 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 IVDP26440 423 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 AVPR1BP47901 424 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 ITGA8P53708 1063 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 RPS15AP62244 130 aaKnown RBP16.79■□□□□ 0.28
NME3-205ENST00000563854 TEDDM1Q5T9Z0 273 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 MFSD4BQ5TF39 518 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 HECTD2Q5U5R9 776 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 KIAA0408Q6ZU52 694 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 SYDE1Q6ZW31 735 aaPredicted RBP16.79■□□□□ 0.28
NME3-205ENST00000563854 C17orf64Q86WR6 236 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 CNTN4Q8IWV2 1026 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 OR9A4Q8NGU2 314 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 ZCCHC10Q8TBK6 192 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 DNAJB14Q8TBM8 379 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 HIST1H2AHQ96KK5 128 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 RUNDC3BQ96NL0 473 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 HIST1H2AJQ99878 128 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 H2AFJQ9BTM1 129 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 PLAC1Q9HBJ0 212 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 MKKSQ9NPJ1 570 aaPredicted RBP16.79■□□□□ 0.28
NME3-205ENST00000563854 NOVA2Q9UNW9 492 aaKnown RBP16.79■□□□□ 0.28
NME3-205ENST00000563854 COPG1Q9Y678 874 aaKnown RBP16.79■□□□□ 0.28
NME3-205ENST00000563854 LRRK2Q5S007 2527 aa16.79■□□□□ 0.28
NME3-205ENST00000563854 HEATR5BQ9P2D3 2071 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 IGLV3-12A0A075B6K2 115 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 CDH1P12830 882 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 SAT1P21673 171 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 SLC26A3P40879 764 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 ARL4CP56559 192 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 IL2P60568 153 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 SNRPNP63162 240 aaKnown RBP16.78■□□□□ 0.28
NME3-205ENST00000563854 Q6ZS92 163 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 PRSS41Q7RTY9 318 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 CREG2Q8IUH2 290 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 KBTBD2Q8IY47 623 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 PPP4R1Q8TF05 950 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 PYCR2Q96C36 320 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 WDR83Q9BRX9 315 aaKnown RBP16.78■□□□□ 0.28
NME3-205ENST00000563854 PCBD2Q9H0N5 130 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 ARL15Q9NXU5 204 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 MKL2Q9ULH7 1088 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 PYCARDQ9ULZ3 195 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 PCDHGA10Q9Y5H3 936 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 SAR1BQ9Y6B6 198 aa16.78■□□□□ 0.28
NME3-205ENST00000563854 MDC1Q14676 2089 aaKnown RBP16.77■□□□□ 0.28
NME3-205ENST00000563854 SLC16A5O15375 505 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 SEMA7AO75326 666 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 GUCA1CO95843 209 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 COX6A1P12074 109 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 IL1RNP18510 177 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 HRH2P25021 359 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 PAFAH1B1P43034 410 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 CSNK1G2P78368 415 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 RELAQ04206 551 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 CDC16Q13042 620 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 ATG9BQ674R7 924 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 FAM45BPQ6NSW5 357 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 HIBCHQ6NVY1 386 aaPredicted RBP16.77■□□□□ 0.28
NME3-205ENST00000563854 VN1R4Q7Z5H5 301 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 ZC3H7AQ8IWR0 971 aaKnown RBP16.77■□□□□ 0.28
NME3-205ENST00000563854 ARHGEF39Q8N4T4 335 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 FAM45AQ8TCE6 357 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 SNF8Q96H20 258 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 OLFM1Q99784 485 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms