RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 HOXC13P31276 330 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 RYKP34925 604 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 EIF2DP41214 584 aaKnown RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 NR4A2P43354 598 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 SGSHP51688 502 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 ZNF140P52738 457 aaPredicted RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 VBP1P61758 197 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 SLC13A2Q13183 592 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 SGCGQ13326 291 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 SLC14A2Q15849 920 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 DPY19L1Q2PZI1 675 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 MANEALQ5VSG8 457 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 ANXA8L1Q5VT79 327 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 TYW3Q6IPR3 259 aaKnown RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 C22orf39Q6P5X5 142 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 OR7G1Q8NGA0 311 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 FAR1Q8WVX9 515 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 OR2AG1Q9H205 316 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 MMP27Q9H306 513 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 TMEM45AQ9NWC5 275 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 MAGED1Q9Y5V3 778 aaPredicted RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 TLL1O43897 1013 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 CD70P32970 193 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 CTSKP43235 329 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 DGKEP52429 567 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 TUBA1BP68363 451 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 MVKQ03426 396 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 KCNAB2Q13303 367 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 MED22Q15528 200 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 ZC3H12BQ5HYM0 836 aaKnown RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 TMEM236Q5W0B7 351 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 RSPO2Q6UXX9 243 aaPredicted RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 TUBA1AQ71U36 451 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 ZFAND4Q86XD8 727 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 LYSMD2Q8IV50 215 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 SLC22A15Q8IZD6 547 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 KRT78Q8N1N4 520 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 C11orf65Q8NCR3 313 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 PJA1Q8NG27 643 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 RASSF5Q8WWW0 418 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 MYEOVQ96EZ4 313 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 RUVBL1Q9Y265 456 aaKnown RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 GPR45Q9Y5Y3 372 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 GRXCR2A6NFK2 248 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 TTC34A8MYJ7 566 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 TNFRSF11BO00300 401 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 PDYNP01213 254 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 PRPS1L1P21108 318 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 CDH12P55289 794 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 FAM189BP81408 668 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 SRSF11Q05519 484 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 MGAT3Q09327 533 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 FXNQ16595 210 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 LY6G5CQ5SRR4 150 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 ZDHHC20Q5W0Z9 365 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 MED27Q6P2C8 311 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 OR5AK3PQ8NH89 298 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 OR5K1Q8NHB7 308 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 VANGL1Q8TAA9 524 aaPredicted RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 NUDT8Q8WV74 236 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 DPF3Q92784 378 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 ZNF566Q969W8 418 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 NACC2Q96BF6 587 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 KAT8Q9H7Z6 458 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 CCNB1IP1Q9NPC3 277 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 ZNF221Q9UK13 617 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 NUP214P35658 2090 aaPredicted RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 DOCK3Q8IZD9 2030 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 TRIP12Q14669 1992 aaPredicted RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 ANK1P16157 1881 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 A0A0G2JN53 185 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 LEFTY2O00292 366 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 UPK1AO00322 258 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 TEX28O15482 410 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 OR10H3O60404 316 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 IGLV3-25P01717 112 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 MMP2P08253 660 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 RPS17P08708 135 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 AGXTP21549 392 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 ACRV1P26436 265 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 SOX6P35712 828 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 CASP3P42574 277 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 MRPL19P49406 292 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 NKX2-5P52952 324 aaPredicted RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 MRPS15P82914 257 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 ARF5P84085 180 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 CARTPTQ16568 116 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 ENPP6Q6UWR7 440 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 EIF3MQ7L2H7 374 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 PHYKPLQ8IUZ5 450 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 CHPFQ8IZ52 775 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 DTWD1Q8N5C7 304 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 MYLIPQ8WY64 445 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 CASD1Q96PB1 797 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 SLC22A12Q96S37 553 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 ELAC1Q9H777 363 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 VAPAQ9P0L0 249 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 TBC1D14Q9P2M4 693 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 DEC1Q9P2X7 70 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms