RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 TMLHEQ9NVH6 421 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 ZIM2Q9NZV7 527 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 MPP6Q9NZW5 540 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 H2AFY2Q9P0M6 372 aaPredicted RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 IFT80Q9P2H3 777 aaPredicted RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 ARPP21Q9UBL0 812 aaPredicted RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 UBQLN2Q9UHD9 624 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 NUFIP1Q9UHK0 495 aaKnown RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 SSR3Q9UNL2 185 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 BTBD3Q9Y2F9 522 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 HSPB11Q9Y547 144 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 DNMT3AQ9Y6K1 912 aaPredicted RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 KIAA1217Q5T5P2 1943 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 ALKQ9UM73 1620 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 A0A087X0B3 334 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 A0A1W2PPL8 197 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 TCRBV3S1A0A5B6 114 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 BTBD17A6NE02 478 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 NUDT19A8MXV4 375 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 TRIM49D1C9J1S8 452 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 TMEM238C9JI98 176 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ANKRD63C9JTQ0 380 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 E7ENX8 843 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 J3QW42 95 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 AIPO00170 330 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 SOCS7O14512 581 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 CXCL11O14625 94 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 GSTA4O15217 222 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 KCNAB3O43448 404 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 SSX4O60224 188 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 FMO6PO60774 539 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 MITFO75030 526 aaPredicted RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 SDC3O75056 442 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ERN1O75460 977 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 CYP7B1O75881 506 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACSL3O95573 720 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 CBX7O95931 251 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ONECUT2O95948 504 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 CSTAP01040 98 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 PPBPP02775 128 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 HEXAP06865 529 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 CTXN2P0C2S0 81 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 LCP1P13796 627 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 DAOP14920 347 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 CHRNB2P17787 502 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 NELFEP18615 380 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 ANXA7P20073 488 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 PCMT1P22061 227 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 RFX1P22670 979 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ADRA1DP25100 572 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 RPL10P27635 214 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 PSMB6P28072 239 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 PPP2R1BP30154 601 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 CALCRP30988 508 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 HIBADHP31937 336 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 SHMT2P34897 504 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 LIPAP38571 399 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 PTGFRP43088 359 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 BAG6P46379 1132 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 BRCC3P46736 316 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 GRIA4P48058 902 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 KCNJ3P48549 501 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 RARRES1P49788 294 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 GP2P55259 537 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACTBP60709 375 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 PSME3P61289 254 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACTA2P62736 377 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACTG1P63261 375 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACTG2P63267 376 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACTC1P68032 377 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACTA1P68133 377 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ADARB1P78563 741 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 DCDP81605 110 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 HTRA4P83105 476 aaPredicted RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 CSTF1Q05048 431 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACSM1Q08AH1 577 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 OVGP1Q12889 678 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ZNF155Q12901 538 aaPredicted RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 SPP2Q13103 211 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 CHIT1Q13231 466 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 PICALMQ13492 652 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 TDGQ13569 410 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 EXOSC2Q13868 293 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 IRF3Q14653 427 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 PLCL1Q15111 1095 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 NEDD8Q15843 81 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.8□□□□□ -1.64
TCF4-215ENST00000562638 TMEM119Q4V9L6 283 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 BCL7AQ4VC05 210 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ATP13A5Q4VNC0 1218 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ACTBL2Q562R1 376 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 FAM69AQ5T7M9 428 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 RRAGBQ5VZM2 374 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 WSCD1Q658N2 575 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ARL6IP4Q66PJ3 421 aaKnown RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 DHRS7BQ6IAN0 325 aaPredicted RBP4.8□□□□□ -1.64
TCF4-215ENST00000562638 PRR5LQ6MZQ0 368 aa4.8□□□□□ -1.64
TCF4-215ENST00000562638 ESRP1Q6NXG1 681 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms