RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ADAM12O43184 909 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 DFNA5O60443 496 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 PGRP06401 933 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 CCNCP24863 283 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 HLA-DMAP28067 261 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 DAPP51397 102 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 CYP4F2P78329 520 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 TEKQ02763 1124 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 CREMQ03060 361 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 CYP4F3Q08477 520 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 QPRTQ15274 297 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 PLA2G4EQ3MJ16 856 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 PCID2Q5JVF3 399 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 TYW3Q6IPR3 259 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 NAPEPLDQ6IQ20 393 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 TMPRSS11AQ6ZMR5 421 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 TMCO2Q7Z6W1 182 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 KIF18BQ86Y91 864 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 CCDC71Q8IV32 467 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 CPA6Q8N4T0 437 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 OR10A6Q8NH74 314 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 ZNF675Q8TD23 568 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 BCL7CQ8WUZ0 217 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 IGSF8Q969P0 613 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 CASD1Q96PB1 797 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 INPPL1O15357 1258 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 ATG13O75143 517 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 IFNA16P05015 189 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 RPS3P23396 243 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■■■□□ 17.3
GTF3C1-203ENST00000562609 CRISP3P54108 245 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 UBE3AQ05086 875 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 RGS1Q08116 209 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 SLC10A7Q0GE19 358 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 ELP6Q0PNE2 266 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 GNA13Q14344 377 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 TBCEQ15813 527 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 TATDN3Q17R31 274 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 PROX2Q3B8N5 592 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 MS4A13Q5J8X5 152 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 ISCA2Q86U28 154 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 NLGN4YQ8NFZ3 816 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 ZNF296Q8WUU4 475 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 AKAP1Q92667 903 aaKnown RBP eCLIP13.6□□□□□ -0.233e-8■□□□□ 11
GTF3C1-203ENST00000562609 HMCESQ96FZ2 354 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 MAGEB10Q96LZ2 347 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 GLOD4Q9HC38 313 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 ING3Q9NXR8 418 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
GTF3C1-203ENST00000562609 FAM234BA2RU67 622 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 EFCAB10A6NFE3 127 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 MATN3O15232 486 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ACSL4O60488 711 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 SEC22BO75396 215 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 VNN2O95498 520 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 NPPAP01160 153 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 FHP07954 510 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 KIR2DL3P43628 341 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 RGS6P49758 472 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 FUT10Q6P4F1 479 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 TSPYL5Q86VY4 417 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 CFAP52Q8N1V2 620 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 AADATQ8N5Z0 425 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 RTL3Q8N8U3 475 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 FNDC5Q8NAU1 212 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 OR52K2Q8NGK3 314 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PCNPQ8WW12 178 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PSMG2Q969U7 264 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 TBL1YQ9BQ87 522 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 THUMPD3Q9BV44 507 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 FSD1LQ9BXM9 530 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 NT5MQ9NPB1 228 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 NDRG4Q9ULP0 352 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 SCML1Q9UN30 329 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 DIMT1Q9UNQ2 313 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ERVW-1Q9UQF0 538 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 AUP1Q9Y679 476 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 MTMR11A4FU01 709 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 CCL22O00626 93 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 SCAMP3O14828 347 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 HOXD4P09016 255 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ATF6P18850 670 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ALAS2P22557 587 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ASAH1Q13510 395 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 GTF2H3Q13889 308 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 POU4F3Q15319 338 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 GPR19Q15760 415 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 CPZQ66K79 652 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 FBXL22Q6P050 247 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 CEP68Q76N32 757 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 COMMD7Q86VX2 200 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 P3H2Q8IVL5 708 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 FAM126BQ8IXS8 530 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 CHPFQ8IZ52 775 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 CAMKK1Q8N5S9 505 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PROKR1Q8TCW9 393 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 DCLRE1CQ96SD1 692 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms