RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 C1QBP02746 253 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 SERPINF2P08697 491 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 LINC00032P0C843 101 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 DNAJB2P25686 324 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 C21orf33P30042 268 aaPredicted RBP12.9□□□□□ -0.34
CLK3-206ENST00000562078 TEKQ02763 1124 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 ITKQ08881 620 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 IL18R1Q13478 541 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 ESRP1Q6NXG1 681 aaKnown RBP12.9□□□□□ -0.34
CLK3-206ENST00000562078 FBXL22Q6P050 247 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 SVOPLQ8N434 492 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 PNPLA1Q8N8W4 532 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 OR7D4Q8NG98 312 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 COQ8BQ96D53 544 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 FAM83DQ9H4H8 585 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 SP110Q9HB58 689 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 OLA1Q9NTK5 396 aaKnown RBP12.9□□□□□ -0.34
CLK3-206ENST00000562078 TMEM248Q9NWD8 314 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 SLC2A6Q9UGQ3 507 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 PKP3Q9Y446 797 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.35
CLK3-206ENST00000562078 STX7O15400 261 aaKnown RBP12.89□□□□□ -0.35
CLK3-206ENST00000562078 ALPPP05187 535 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 RPLP0P05388 317 aaKnown RBP12.89□□□□□ -0.35
CLK3-206ENST00000562078 ZFP36L2P47974 494 aaKnown RBP12.89□□□□□ -0.35
CLK3-206ENST00000562078 WNT3AP56704 352 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 SLC10A7Q0GE19 358 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 BTN1A1Q13410 526 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 COQ5Q5HYK3 327 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 XKRXQ6PP77 449 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 CYP4Z1Q86W10 505 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 TWIST2Q8WVJ9 160 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 BADQ92934 168 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 PSMG2Q969U7 264 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 REPS1Q96D71 796 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 PPM1MQ96MI6 270 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 FRMD6Q96NE9 622 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 RPRD1AQ96P16 312 aaPredicted RBP12.89□□□□□ -0.35
CLK3-206ENST00000562078 BARD1Q99728 777 aaKnown RBP12.89□□□□□ -0.35
CLK3-206ENST00000562078 MYOCQ99972 504 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 TTPALQ9BTX7 342 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 NIPAL2Q9H841 368 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 FNIP2Q9P278 1114 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 ORC6Q9Y5N6 252 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 IGLV3-10A0A075B6K4 115 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 ADAM12O43184 909 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 TLL1O43897 1013 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 TLR5O60602 858 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 PPM1BO75688 479 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 EPHA2P29317 976 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 UFM1P61960 85 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 EMX2Q04743 252 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 PPIGQ13427 754 aaKnown RBP eCLIP12.89□□□□□ -0.356e-7■■■□□ 17.1
CLK3-206ENST00000562078 POU4F3Q15319 338 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 ARMCX4Q5H9R4 360 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 TYW3Q6IPR3 259 aaKnown RBP12.89□□□□□ -0.35
CLK3-206ENST00000562078 TMEM81Q6P7N7 255 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 LIPIQ6XZB0 460 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 SETD9Q8NE22 299 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 RIT1Q92963 219 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 ZNF689Q96CS4 500 aaPredicted RBP12.89□□□□□ -0.35
CLK3-206ENST00000562078 MYEOVQ96EZ4 313 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 SLC47A1Q96FL8 570 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 ZNF558Q96NG5 402 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 PPP1R2P1Q96PQ5 205 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
CLK3-206ENST00000562078 TUBB1Q9H4B7 451 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 ACTR8Q9H981 624 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 LIMD1Q9UGP4 676 aa12.89□□□□□ -0.35
CLK3-206ENST00000562078 H7C4K7 107 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 IGLV3-27P01718 113 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 RPL17P18621 184 aaKnown RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 IGFBP5P24593 272 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 CD86P42081 329 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 GNPDA1P46926 289 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 RENBPP51606 427 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 PLIN5Q00G26 463 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 DSC2Q02487 901 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 RCAN2Q14206 197 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 ZNF79Q15937 498 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 MARC1Q5VT66 337 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 RANBP10Q6VN20 620 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 DGLUCYQ7Z3D6 616 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 FNDC5Q8NAU1 212 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 ST13P5Q8NFI4 369 aaPredicted RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 NLGN4YQ8NFZ3 816 aaPredicted RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 VANGL1Q8TAA9 524 aaPredicted RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 ASB15Q8WXK1 588 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 AKAP1Q92667 903 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLK3-206ENST00000562078 TMEM169Q96HH4 297 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 IGSF21Q96ID5 467 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 SPATA9Q9BWV2 254 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 TTLL2Q9BWV7 592 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms