RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ZNF605Q86T29 641 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 ZSWIM9Q86XI8 627 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 DNAJC22Q8N4W6 341 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 UTP15Q8TED0 518 aaKnown RBP13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 BHMTQ93088 406 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 FEVQ99581 238 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 EPYCQ99645 322 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 CENPOQ9BU64 300 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 NUAK2Q9H093 628 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 RAD18Q9NS91 495 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 QPCTLQ9NXS2 382 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 KCTD5Q9NXV2 234 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 RAPGEFL1Q9UHV5 662 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 PEX16Q9Y5Y5 336 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 A3GALT2U3KPV4 340 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 K7ERQ8 282 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 TNFRSF11BO00300 401 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 STC2O76061 302 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 EOMESO95936 686 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 ASGR1P07306 291 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 NUDT7P0C024 238 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 HIST1H2AGP0C0S8 130 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 BPIP17213 487 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 ATF6P18850 670 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 HIST1H2ADP20671 130 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 GKP32189 559 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 SEMG2Q02383 582 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 SRSF11Q05519 484 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 ABRQ12979 859 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 TAF1CQ15572 869 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 UGT8Q16880 541 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 HECTD3Q5T447 861 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 ADGRF1Q5T601 910 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 LYPLAL1Q5VWZ2 237 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 CELF2-AS1Q8N7Q2 184 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 CSGALNACT1Q8TDX6 532 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 HIST1H2AHQ96KK5 128 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 HIST1H2AJQ99878 128 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 H2AFJQ9BTM1 129 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 GABARAPL3Q9BY60 117 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 CEP44Q9C0F1 390 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 ROGDIQ9GZN7 287 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 TPT1P8Q9HAU6 139 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 NMRK2Q9NPI5 230 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 EHD3Q9NZN3 535 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 PCDHGB6Q9Y5F9 930 aa13.52□□□□□ -0.25
VPS9D1-202ENST00000561976 ITPKAP23677 461 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 BMPR1AP36894 532 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 HSPA14Q0VDF9 509 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 MRPL58Q14197 206 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 PTCHD3Q3KNS1 767 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 FRG2Q64ET8 278 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 THOC7Q6I9Y2 204 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 OR52J3Q8NH60 311 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 MAL2Q969L2 176 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 CEP19Q96LK0 163 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 FRG2BQ96QU4 278 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 YME1L1Q96TA2 773 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 FZD4Q9ULV1 537 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 SNX8Q9Y5X2 465 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 PLXNA4Q9HCM2 1894 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 PNMA8CA0A1B0GUJ8 204 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 TBL1XO60907 577 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 ADORA3P0DMS8 318 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 SOX6P35712 828 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 KCNJ10P78508 379 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 MTAPQ13126 283 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 LRRC70Q7Z2Q7 622 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 NANOGNBQ7Z5D8 188 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 MMAAQ8IVH4 418 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 C7orf34Q96L11 122 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 COL21A1Q96P44 957 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 PLCXD1Q9NUJ7 323 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 CCDC59Q9P031 241 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 SLC22A14Q9Y267 594 aa13.51□□□□□ -0.25
VPS9D1-202ENST00000561976 KCNE1BA0A087WTH5 132 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 KRT75O95678 551 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 PTHP01270 115 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 HNF1BP35680 557 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 BCL2L1Q07817 233 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 ST3GAL4Q11206 333 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 FOXD4Q12950 439 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 CSTF3Q12996 717 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 FBXO43Q4G163 708 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 ANGPTL8Q6UXH0 198 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 NXPE1Q8N323 547 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 SLC5A8Q8N695 610 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 WBP2Q969T9 261 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 SH3KBP1Q96B97 665 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 PLD4Q96BZ4 506 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 NDEL1Q9GZM8 345 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 NXF2Q9GZY0 626 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 MARCH7Q9H992 704 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 IMPAD1Q9NX62 359 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 PIKFYVEQ9Y2I7 2098 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 KRT87PA6NCN2 255 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 PDZK1P1A8MUH7 402 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms