RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PHACTR4Q8IZ21 702 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 FRMD1Q8N878 549 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 OR2A1Q8NGT9 310 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 LCN9Q8WX39 176 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 SLC6A18Q96N87 628 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 ACAT2Q9BWD1 397 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 AASDHPPTQ9NRN7 309 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 ZNF624Q9P2J8 865 aaPredicted RBP16.47■□□□□ 0.23
HDDC3-206ENST00000561036 CD300AQ9UGN4 299 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 KIR2DS5A0A0G2JLQ3 304 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 A0A0G2JNG1 304 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 KIR2DS3K7RE56 304 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 SCAMP1O15126 338 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 SEMA3DO95025 777 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 PSMG1O95456 288 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 EML2O95834 649 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 PGRP06401 933 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 XRCC1P18887 633 aaPredicted RBP16.46■□□□□ 0.23
HDDC3-206ENST00000561036 HNRNPFP52597 415 aaKnown RBP16.46■□□□□ 0.23
HDDC3-206ENST00000561036 RACK1P63244 317 aaKnown RBP16.46■□□□□ 0.23
HDDC3-206ENST00000561036 TRAP1Q12931 704 aaKnown RBP16.46■□□□□ 0.23
HDDC3-206ENST00000561036 KIR2DS5Q14953 304 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 PAGE3Q5JUK9 113 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 IYDQ6PHW0 289 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 AMIGO1Q86WK6 493 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 RIMKLAQ8IXN7 391 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 RNF175Q8N4F7 328 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 C1orf52Q8N6N3 182 aaKnown RBP16.46■□□□□ 0.23
HDDC3-206ENST00000561036 TTLQ8NG68 377 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 CCL4L1Q8NHW4 92 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 SLC13A3Q8WWT9 602 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 SLC22A18Q96BI1 424 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 CCDC124Q96CT7 223 aaKnown RBP16.46■□□□□ 0.23
HDDC3-206ENST00000561036 TMEM74Q96NL1 305 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 TWSG1Q9GZX9 223 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 ZMYND15Q9H091 742 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 XKR8Q9H6D3 395 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 TMEM184CQ9NVA4 438 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 AHSPQ9NZD4 102 aa16.46■□□□□ 0.23
HDDC3-206ENST00000561036 ANKDD1BA6NHY2 528 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 AXIN1O15169 862 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 BCAS2O75934 225 aaPredicted RBP16.45■□□□□ 0.22
HDDC3-206ENST00000561036 ETHE1O95571 254 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 HSD17B1P14061 328 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 CTSEP14091 401 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 SLC6A2P23975 617 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 TACR1P25103 407 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 CD38P28907 300 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 CMPK1P30085 196 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 HOXA6P31267 233 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 TIA1P31483 386 aaKnown RBP eCLIP16.45■□□□□ 0.22
HDDC3-206ENST00000561036 S100A3P33764 101 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 SLC19A1P41440 591 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 SLC7A2P52569 658 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 SRSF11Q05519 484 aaKnown RBP16.45■□□□□ 0.22
HDDC3-206ENST00000561036 PWP1Q13610 501 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 CCNIQ14094 377 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 RBBP5Q15291 538 aaKnown RBP16.45■□□□□ 0.22
HDDC3-206ENST00000561036 FAM174BQ3ZCQ3 159 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 SYT12Q8IV01 421 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 METTL4Q8N3J2 472 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 TBC1D19Q8N5T2 526 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 KRTCAP2Q8N6L1 136 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 EFCAB3Q8N7B9 438 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 TSSK3Q96PN8 268 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 SPNS1Q9H2V7 528 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 RMND5AQ9H871 391 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 MRPS30Q9NP92 439 aaKnown RBP16.45■□□□□ 0.22
HDDC3-206ENST00000561036 POT1Q9NUX5 634 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 CUEDC1Q9NWM3 386 aaPredicted RBP16.45■□□□□ 0.22
HDDC3-206ENST00000561036 TAAR2Q9P1P5 351 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 AP3M1Q9Y2T2 418 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 PLXND1Q9Y4D7 1925 aa16.45■□□□□ 0.22
HDDC3-206ENST00000561036 SPTBN5Q9NRC6 3674 aaKnown RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 A0A1W2PR77 199 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 TRBC2A0A5B9 178 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 FAM221BA6H8Z2 402 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 H7BY64 318 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 K7ESF4 209 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 DNAJA2O60884 412 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 KCNH1O95259 989 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 CHRM5P08912 532 aaPredicted RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 ANXA4P09525 319 aaPredicted RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 PSMB5P28074 263 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 DGKQP52824 942 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 AP2B1P63010 937 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 CSNK1G2P78368 415 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 RAE1P78406 368 aaKnown RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 MEF2AQ02078 507 aaPredicted RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 RPL6Q02878 288 aaKnown RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 TRIM25Q14258 630 aaKnown RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 KIR2DS3Q14952 304 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 MAPKAPK3Q16644 382 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 SPANXN4Q5MJ08 99 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 ADNP2Q6IQ32 1131 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 SLC2A7Q6PXP3 512 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 DLEU7Q6UYE1 221 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 VN1R5Q7Z5H4 357 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 DHDDSQ86SQ9 333 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 TRIM48Q8IWZ4 208 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms