RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CBWD6Q4V339 395 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 FASTKD1Q53R41 847 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 Q5BKY6 102 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CBWD3Q5JTY5 395 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 Q5PR19 223 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CBWD5Q5RIA9 395 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 EXOSC6Q5RKV6 272 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 SPRYD7Q5W111 196 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PM20D1Q6GTS8 502 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 MRNIPQ6NTE8 343 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 LINC00523Q86TU6 105 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CLEC10AQ8IUN9 316 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 WDR49Q8IV35 697 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CCDC185Q8N715 623 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 RTL3Q8N8U3 475 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TMEM52Q8NDY8 209 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 OR52M1Q8NGK5 317 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PSMA8Q8TAA3 256 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PHF10Q8WUB8 498 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TMCO6Q96DC7 493 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ZNF837Q96EG3 531 aaPredicted RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 FBXL20Q96IG2 436 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 FAM167AQ96KS9 214 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 WDR41Q9HAD4 459 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PCDH9Q9HC56 1237 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ABCB10Q9NRK6 738 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ALKBH4Q9NXW9 302 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 MRPL39Q9NYK5 338 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ANAPC7Q9UJX3 599 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CNOT6Q9ULM6 557 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 COA3Q9Y2R0 106 aaPredicted RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 RAD54BQ9Y620 910 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TEX13CA0A0J9YWL9 993 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 LEUTXA8MZ59 168 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TOR1AO14656 332 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PAPSS1O43252 624 aaPredicted RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PLA2G4BP0C869 781 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ALDH4A1P30038 563 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 SERPINH1P50454 418 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ROM1Q03395 351 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 GAD2Q05329 585 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TRAP1Q12931 704 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PPIL2Q13356 520 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 KRR1Q13601 381 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CTF1Q16619 201 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PPP1R3AQ16821 1122 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 DGUOKQ16854 277 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 BMT2Q1RMZ1 405 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 LGSNQ5TDP6 509 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 VWA5B1Q5TIE3 1220 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 STXBP4Q6ZWJ1 553 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 HORMAD1Q86X24 394 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ARHGEF19Q8IW93 802 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CBR4Q8N4T8 237 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TOP6BLQ8N6T0 577 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 DBF4BQ8NFT6 615 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 BEST2Q8NFU1 509 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CLEC4CQ8WTT0 213 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 GTF2H4Q92759 462 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ST6GAL2Q96JF0 529 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 RNF170Q96K19 258 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 SECISBP2Q96T21 854 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 SEMA3CQ99985 751 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 KATNB1Q9BVA0 655 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 AMNQ9BXJ7 453 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 LRRC40Q9H9A6 602 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 FBXO28Q9NVF7 368 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 FBXO40Q9UH90 709 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 NOCTQ9UK39 431 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TCRBV3S1A0A5B6 114 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 TRPC5OSA6NMA1 111 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 YDJCA8MPS7 323 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PDHXO00330 501 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 YKT6O15498 198 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PSTPIP1O43586 416 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 AVILO75366 819 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SCO1O75880 301 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 OR5F1O95221 314 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 GOT2P00505 430 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 YES1P07947 543 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 FGF3P11487 239 aaPredicted RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 AHCYP23526 432 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 IL12AP29459 219 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CYP2C18P33260 490 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CD68P34810 354 aaPredicted RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ABCG1P45844 678 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 YAP1P46937 504 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ACOT2P49753 483 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 BLVRAP53004 296 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC10A2Q12908 348 aaPredicted RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 VEPH1Q14D04 833 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 DUOXA2Q1HG44 320 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PTCHD3Q3KNS1 767 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 LIPMQ5VYY2 423 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PTAR1Q7Z6K3 402 aaPredicted RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 FBXO11Q86XK2 927 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF677Q86XU0 584 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 KATNAL2Q8IYT4 538 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 LGI2Q8N0V4 545 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms