RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 PMM1Q92871 262 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 CD180Q99467 661 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 PKP4Q99569 1192 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 RPF2Q9H7B2 306 aaKnown RBP12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 TBCCD1Q9NVR7 557 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 TMEM5Q9Y2B1 443 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ISPDA4D126 451 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 LCHNA4D1U4 455 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 VNN1O95497 513 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 DSG2Q14126 1118 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 MAD2L1BPQ15013 274 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 SOWAHAQ2M3V2 549 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 C10orf62Q5T681 223 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 KIAA1614Q5VZ46 1190 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 NIPAL1Q6NVV3 410 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 CLEC20AQ6ZU45 233 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 KREMEN2Q8NCW0 462 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 PYCR2Q96C36 320 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 CCM2Q9BSQ5 444 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 WDR26Q9H7D7 661 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 TPT1P8Q9HAU6 139 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 SDHAF3Q9NRP4 125 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 DGKQP52824 942 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 CDH15P55291 814 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 BIRC7Q96CA5 298 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 MMP27Q9H306 513 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 RNF6Q9Y252 685 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 HCN4Q9Y3Q4 1203 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 FXYD6-FXYD2A0A087WZ82 144 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF878C9JN71 531 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR7A10O76100 309 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 CDRT1O95170 752 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ATP4BP51164 291 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 EVX2Q03828 476 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 GPR68Q15743 365 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 GRK1Q15835 563 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 EIF2S3LQ2VIR3 472 aaKnown RBP12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ANKDD1AQ495B1 522 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC25A25Q6KCM7 469 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 MOB2Q70IA6 237 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 DGLUCYQ7Z3D6 616 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC22A16Q86VW1 577 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 S100A16Q96FQ6 103 aaKnown RBP12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 CDK15Q96Q40 435 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 DERL2Q9GZP9 239 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 FXYD6Q9H0Q3 95 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 TAS2R10Q9NYW0 307 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ABCD2Q9UBJ2 740 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF69Q9UC07 566 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 SCP2D1Q9UJQ7 156 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 MGAT4BQ9UQ53 548 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 TEX264Q9Y6I9 313 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ERI3O43414 337 aaKnown RBP12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 SRCP12931 536 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 CD83Q01151 205 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 DGKZQ13574 1117 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 SEMA3AQ14563 771 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 RAB12Q6IQ22 244 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZBTB8BQ8NAP8 495 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 CLEC4DQ8WXI8 215 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 TMEM203Q969S6 136 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 KIAA1191Q96A73 305 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC25A36Q96CQ1 311 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 TMEM80Q96HE8 168 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 JSRP1Q96MG2 331 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF700Q9H0M5 742 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 Q9N2J8 555 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZDHHC2Q9UIJ5 367 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 CDH10Q9Y6N8 788 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF536O15090 1300 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 FAM189A1O60320 539 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 AHSGP02765 367 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF30P17039 623 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 CSKP41240 450 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 MLLT6P55198 1093 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF45Q02386 682 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 TBC1D25Q3MII6 688 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF227Q86WZ6 799 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 PDSS2Q86YH6 399 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 YIPF7Q8N8F6 280 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF431Q8TF32 576 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 ALPK1Q96QP1 1244 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 MCCC2Q9HCC0 563 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 RDH8Q9NYR8 311 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR51F1A6NGY5 319 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 CAPN14A8MX76 684 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 MANBAO00462 879 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 VAMP1P23763 118 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 HSD11B1P28845 292 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 TIGD5Q53EQ6 642 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 SYPL2Q5VXT5 272 aa12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 C12orf43Q96C57 262 aaKnown RBP12.84□□□□□ -0.35
CSPG4P11-201ENST00000560634 COL20A1Q9P218 1284 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms