RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 WDR60Q8WVS4 1066 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 LCN9Q8WX39 176 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 DNASE2BQ8WZ79 361 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 STARD8Q92502 1023 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 APOLD1Q96LR9 279 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 TMEM74Q96NL1 305 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 NRTNQ99748 197 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 SARGQ9BW04 601 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 ACAT2Q9BWD1 397 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 DUSP15Q9H1R2 295 aaPredicted RBP13.91□□□□□ -0.18
ZEB1-218ENST00000560196 XKR8Q9H6D3 395 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 SPAG4Q9NPE6 437 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 TMEM184CQ9NVA4 438 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 TMEM181Q9P2C4 612 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 KLF15Q9UIH9 416 aa13.91□□□□□ -0.18
ZEB1-218ENST00000560196 SPTBN5Q9NRC6 3674 aaKnown RBP13.91□□□□□ -0.18
ZEB1-218ENST00000560196 C15orf38-AP3S2A0A0A6YYH1 394 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 TRBC2A0A5B9 178 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 C9JVG2 144 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 TRIM38O00635 465 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 SEMA3DO95025 777 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 ETHE1O95571 254 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 CSF2P04141 144 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 CTSEP14091 401 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 PRPS1L1P21108 318 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 ME2P23368 584 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 PSMB5P28074 263 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 ASMTP46597 345 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 HNRNPFP52597 415 aaKnown RBP13.9□□□□□ -0.18
ZEB1-218ENST00000560196 UBE2IP63279 158 aaKnown RBP13.9□□□□□ -0.18
ZEB1-218ENST00000560196 CSNK1G2P78368 415 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 CEACAM7Q14002 265 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 KIR2DS3Q14952 304 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 SNCBQ16143 134 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 DPY19L1Q2PZI1 675 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 TIGD2Q4W5G0 525 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 SAMD4BQ5PRF9 694 aaKnown RBP13.9□□□□□ -0.18
ZEB1-218ENST00000560196 RIPOR1Q6ZS17 1223 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 VN1R5Q7Z5H4 357 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 ARPINQ7Z6K5 226 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 RIMKLAQ8IXN7 391 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 RBM12BQ8IXT5 1001 aaKnown RBP13.9□□□□□ -0.18
ZEB1-218ENST00000560196 METTL4Q8N3J2 472 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 RNF175Q8N4F7 328 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 ZNF740Q8NDX6 193 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 TTLQ8NG68 377 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 JADE3Q92613 823 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 VPS33AQ96AX1 596 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 SLC22A18Q96BI1 424 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 LRRC58Q96CX6 371 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 TCEAL2Q9H3H9 227 aaPredicted RBP13.9□□□□□ -0.18
ZEB1-218ENST00000560196 TM9SF3Q9HD45 589 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 CUEDC1Q9NWM3 386 aaPredicted RBP13.9□□□□□ -0.18
ZEB1-218ENST00000560196 ABCD2Q9UBJ2 740 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 CD300AQ9UGN4 299 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 BAIAP2L1Q9UHR4 511 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 POMPQ9Y244 141 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 SLCO1B1Q9Y6L6 691 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 XIRP2A4UGR9 3374 aa13.9□□□□□ -0.18
ZEB1-218ENST00000560196 IGKV1-8A0A0C4DH67 115 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 PRAMEF33A0A0G2JMD5 474 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 TLR4O00206 839 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 PDE5AO76074 875 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 FKBP9O95302 570 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 CHRM5P08912 532 aaPredicted RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 NME1P15531 152 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 JUNDP17535 347 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 TACR1P25103 407 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 CMPK1P30085 196 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 PEBP1P30086 187 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 TIA1P31483 386 aaKnown RBP eCLIP13.89□□□□□ -0.191e-5■■■□□ 19.1
ZEB1-218ENST00000560196 RAE1P78406 368 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 MEF2AQ02078 507 aaPredicted RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 SIGLEC14Q08ET2 396 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 NFYCQ13952 458 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 RBBP5Q15291 538 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 PAGE3Q5JUK9 113 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 C1orf146Q5VVC0 180 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 CWF19L1Q69YN2 538 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 ADNP2Q6IQ32 1131 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 TAF8Q7Z7C8 310 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 HPS6Q86YV9 775 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 TRIM48Q8IWZ4 208 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 ADGRF3Q8IZF5 1079 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 SDR16C5Q8N3Y7 309 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 C1orf52Q8N6N3 182 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 ENDOVQ8N8Q3 282 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 AVL9Q8NBF6 648 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 OR2L3Q8NG85 312 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 SLC13A3Q8WWT9 602 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 SLC45A3Q96JT2 553 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 HSPA12BQ96MM6 686 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 SRMSQ9H3Y6 488 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 DCLRE1BQ9H816 532 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 MRPS30Q9NP92 439 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 SUCOQ9UBS9 1254 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 APOBEC3BQ9UH17 382 aaKnown RBP13.89□□□□□ -0.19
ZEB1-218ENST00000560196 BCAP29Q9UHQ4 241 aa13.89□□□□□ -0.19
ZEB1-218ENST00000560196 INVSQ9Y283 1065 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms