RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 HKDC1Q2TB90 917 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 THEMIS2Q5TEJ8 643 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 CPZQ66K79 652 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 CAPN12Q6ZSI9 719 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 PPP1R32Q7Z5V6 425 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 MRGPREQ86SM8 312 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 ADAMTSL2Q86TH1 951 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 DTWD1Q8N5C7 304 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 CSNK1A1LQ8N752 337 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 MNS1Q8NEH6 495 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 FBF1Q8TES7 1133 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 TGIF2Q9GZN2 237 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 GPAMQ9HCL2 828 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 NXT1Q9UKK6 140 aaKnown RBP12.58□□□□□ -0.4
SMAD3-213ENST00000560175 CDC14AQ9UNH5 594 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 A0A1W2PQ72 361 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 ARGFXA6NJG6 315 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 P2RX6O15547 441 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 DNAJB5O75953 348 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 IGHEP01854 428 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 PDGFAP04085 211 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 EIF2S1P05198 315 aaKnown RBP12.57□□□□□ -0.4
SMAD3-213ENST00000560175 SAT1P21673 171 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 STX2P32856 288 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 SLC6A12P48065 614 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 RRADP55042 308 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 SNRPNP63162 240 aaKnown RBP12.57□□□□□ -0.4
SMAD3-213ENST00000560175 ATP1A4Q13733 1029 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 DSG2Q14126 1118 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 USP10Q14694 798 aaKnown RBP12.57□□□□□ -0.4
SMAD3-213ENST00000560175 LACTB2Q53H82 288 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-213ENST00000560175 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 PLD3Q8IV08 490 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 AMER3Q8N944 861 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 STT3BQ8TCJ2 826 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 RERGQ96A58 199 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-213ENST00000560175 PYCR2Q96C36 320 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 RHBDF1Q96CC6 855 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 TSPAN17Q96FV3 270 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 TSPYL1Q9H0U9 437 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 CAB39LQ9H9S4 337 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 CTSFQ9UBX1 484 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 ANAPC2Q9UJX6 822 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 SCN3AQ9NY46 2000 aa12.57□□□□□ -0.4
SMAD3-213ENST00000560175 HMX2A2RU54 273 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CTAGE15A4D2H0 777 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 AGPSO00116 658 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 SOCS6O14544 535 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 FAM155BO75949 473 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 GUCA1CO95843 209 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 ANXA5P08758 320 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 ZGLP1P0C6A0 271 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CTAGE8P0CG41 777 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CCDC166P0CW27 439 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CDH1P12830 882 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CD1DP15813 335 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 STMN1P16949 149 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CCL11P51671 97 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 FOXL2P58012 376 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 RAB10P61026 200 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 ATP6V0D1P61421 351 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 TGFBIQ15582 683 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 TSNQ15631 228 aaKnown RBP12.56□□□□□ -0.4
SMAD3-213ENST00000560175 DCAF10Q5QP82 559 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 ATG9BQ674R7 924 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 TMEM214Q6NUQ4 689 aaKnown RBP12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CEP128Q6ZU80 1094 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CTAGE6Q86UF2 777 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 THOC6Q86W42 341 aaKnown RBP12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CTAGE4Q8IX94 777 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 PPM1NQ8N819 430 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 MFSD9Q8NBP5 474 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 ZNF592Q92610 1267 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 NEIL2Q969S2 332 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CABS1Q96KC9 395 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 FER1L6-AS2Q96M78 137 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 SMAD5Q99717 465 aaKnown RBP12.56□□□□□ -0.4
SMAD3-213ENST00000560175 ZNF71Q9NQZ8 489 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-213ENST00000560175 ACSS2Q9NR19 701 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 SEMA3GQ9NS98 782 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 P4HTMQ9NXG6 502 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 TXNDC16Q9P2K2 825 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 COPG2Q9UBF2 871 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 CTNNAL1Q9UBT7 734 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 ZNF282Q9UDV7 671 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-213ENST00000560175 MAP4K5Q9Y4K4 846 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 HS3ST3B1Q9Y662 390 aa12.56□□□□□ -0.4
SMAD3-213ENST00000560175 TRBC2A0A5B9 178 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 NPEPPSL1A6NEC2 478 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 H0YIG0 161 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 TAPBPO15533 448 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 PRPF4O43172 522 aaKnown RBP eCLIP12.55□□□□□ -0.42e-7■■■■□ 20.5
SMAD3-213ENST00000560175 PHGDHO43175 533 aaKnown RBP12.55□□□□□ -0.4
SMAD3-213ENST00000560175 NSA2O95478 260 aaKnown RBP12.55□□□□□ -0.4
SMAD3-213ENST00000560175 SLC35E2BP0CK96 405 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 OTX2P32243 289 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 BCL6P41182 706 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms