RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ORAI3Q9BRQ5 295 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 FOXQ1Q9C009 403 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 TMEM168Q9H0V1 697 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 RHBGQ9H310 441 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 NANOGQ9H9S0 305 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 FBXL21Q9UKT6 434 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 ICKQ9UPZ9 632 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 TRIOO75962 3097 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 A0A1W2PPC4 97 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 PRICKLE3O43900 615 aaPredicted RBP12.2□□□□□ -0.46
USP3-213ENST00000559711 KDM1AO60341 852 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 ANP32DO95626 131 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 EML2O95834 649 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 PTX3P26022 381 aaPredicted RBP12.2□□□□□ -0.46
USP3-213ENST00000559711 PTDSS1P48651 473 aaKnown RBP12.2□□□□□ -0.46
USP3-213ENST00000559711 PHC1P78364 1004 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 PHEXP78562 749 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 MEF2AQ02078 507 aaPredicted RBP12.2□□□□□ -0.46
USP3-213ENST00000559711 PRDX1Q06830 199 aaKnown RBP12.2□□□□□ -0.46
USP3-213ENST00000559711 MTAPQ13126 283 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 MAPKAPK3Q16644 382 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 C6orf10Q5SRN2 563 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 ICE2Q659A1 982 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 MSANTD1Q6ZTZ1 278 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 NRROSQ86YC3 692 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 SLC22A18ASQ8N1D0 253 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 C1orf52Q8N6N3 182 aaKnown RBP12.2□□□□□ -0.46
USP3-213ENST00000559711 HIPK4Q8NE63 616 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 OR2A1Q8NGT9 310 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 DNAJB8Q8NHS0 232 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 CCL4L1Q8NHW4 92 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 FAM174AQ8TBP5 190 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 PYDC1Q8WXC3 89 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 CGREF1Q99674 301 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 AIF1LQ9BQI0 150 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 PCDHAC1Q9H158 963 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 XKR8Q9H6D3 395 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 CUEDC1Q9NWM3 386 aaPredicted RBP12.2□□□□□ -0.46
USP3-213ENST00000559711 ANGPTL2Q9UKU9 493 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 MAN2B2Q9Y2E5 1009 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.2□□□□□ -0.46
USP3-213ENST00000559711 PCDHB11Q9Y5F2 797 aa12.2□□□□□ -0.46
USP3-213ENST00000559711 PRAMEF33A0A0G2JMD5 474 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 SPTY2D1-AS1A0A0U1RR47 76 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 H3BNX3 289 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 KCNH1O95259 989 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 RASGRP1O95267 797 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 TNFP01375 233 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 PSMB5P28074 263 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 SERPINB1P30740 379 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 S100A3P33764 101 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ACTR1BP42025 376 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ASMTP46597 345 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 HNRNPFP52597 415 aaKnown RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 EEFSECP57772 596 aaKnown RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 ACTR1AP61163 376 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 REEP5Q00765 189 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 SRSF11Q05519 484 aaKnown RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 BNIP2Q12982 314 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 DPY19L1Q2PZI1 675 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 RABL3Q5HYI8 236 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ZFP1Q6P2D0 407 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 SYT12Q8IV01 421 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 GJD3Q8N144 294 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 SIX5Q8N196 739 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 METTL4Q8N3J2 472 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 FRMD1Q8N878 549 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 BHLHE22Q8NFJ8 381 aaPredicted RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 OR8J3Q8NGG0 315 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 OR52E6Q96RD3 313 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ZNF624Q9P2J8 865 aaPredicted RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 MAPRE3Q9UPY8 281 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 NEUROG3Q9Y4Z2 214 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 H7BY64 318 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ERN1O75460 977 aaKnown RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 TGFB1P01137 390 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ANXA4P09525 319 aaPredicted RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 F3P13726 295 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 TIA1P31483 386 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP3-213ENST00000559711 CSNK1G2P78368 415 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ABATP80404 500 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 EIF2B5Q13144 721 aaKnown RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 RBBP5Q15291 538 aaKnown RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 SLC30A9Q6PML9 568 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 RNF111Q6ZNA4 994 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ARMCX6Q7L4S7 300 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 SPEM1Q8N4L4 309 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ANKRD53Q8N9V6 530 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP3-213ENST00000559711 GPBAR1Q8TDU6 330 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 NRG4Q8WWG1 115 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 RLN3Q8WXF3 142 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 STARD8Q92502 1023 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 ZUFSPQ96AP4 578 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 CLDN23Q96B33 292 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 PRAP1Q96NZ9 151 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 EBPLQ9BY08 206 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 TPSD1Q9BZJ3 242 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms