RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 TCAIMQ8N3R3 496 aa15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 SNX31Q8N9S9 440 aa15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 PROKR1Q8TCW9 393 aa15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 ZNF285Q96NJ3 590 aa15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 GBP5Q96PP8 586 aa15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 OR2A5Q96R48 311 aa15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 DPH2Q9BQC3 489 aaPredicted RBP15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 CNOT10Q9H9A5 744 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 NUDT4Q9NZJ9 180 aa15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 IFT80Q9P2H3 777 aaPredicted RBP15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 TBK1Q9UHD2 729 aa15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 RUVBL1Q9Y265 456 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 DSPP15924 2871 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-206ENST00000558649 FER1L5A0AVI2 2057 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 CDC14CA4D256 554 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 FITM1A5D6W6 292 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 SMIM23A6NLE4 172 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 OR1F1O43749 312 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 CCNT2O60583 730 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 MED26O95402 600 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 SHBGP04278 402 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 PTPN4P29074 926 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 SLC6A12P48065 614 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 CDC20Q12834 499 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 ERCC6LQ2NKX8 1250 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 FAM214AQ32MH5 1076 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 NKAIN1Q4KMZ8 207 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 LGSNQ5TDP6 509 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 ZNF517Q6ZMY9 492 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 PLD6Q8N2A8 252 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 PDPRQ8NCN5 879 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 SCYL1Q96KG9 808 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 ATOH8Q96SQ7 321 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 MACROD1Q9BQ69 325 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 CCDC77Q9BR77 488 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 DHRS4Q9BTZ2 278 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 GPR87Q9BY21 358 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 NLNQ9BYT8 704 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 ZNF358Q9NW07 568 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 PSMC3IPQ9P2W1 217 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 FARSAQ9Y285 508 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 KCNE2Q9Y6J6 123 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 MAU2Q9Y6X3 613 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 CFAP47Q6ZTR5 3102 aa15.13■□□□□ 0.01
RABGGTA-206ENST00000558649 ITPR1Q14643 2758 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 SYCE1LA8MT33 242 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 LCMT2O60294 686 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 CREG1O75629 220 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 SERPIND1P05546 499 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 ITGAXP20702 1163 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 VARSP26640 1264 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 MAGEA12P43365 314 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 SLCO1A2P46721 670 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 GCGRP47871 477 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 OR1D4P47884 311 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 AGTR2P50052 363 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 MC1RQ01726 317 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 CDC16Q13042 620 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 ACAP2Q15057 778 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 NCF4Q15080 339 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 YOD1Q5VVQ6 348 aaPredicted RBP15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 ADGRD1Q6QNK2 874 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 ZNF740Q8NDX6 193 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 ABHD11Q8NFV4 315 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 SNRNP27Q8WVK2 155 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 EXTL1Q92935 676 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 ISL2Q96A47 359 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 C10orf90Q96M02 699 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 SPNS1Q9H2V7 528 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 DNAJC11Q9NVH1 559 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 CPSF2Q9P2I0 782 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 PCDHGA6Q9Y5G7 932 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 CACNA1BQ00975 2339 aa15.12■□□□□ 0.01
RABGGTA-206ENST00000558649 PTPRQQ9UMZ3 2332 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 IQANK1A0A1B0GTG1 560 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 STK16O75716 305 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 IPO13O94829 963 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 CAPN1P07384 714 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 FURINP09958 794 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 RAB40ALP0C0E4 278 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 GFAPP14136 432 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 FOXL2P58012 376 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 RELAQ04206 551 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 IL10RAQ13651 578 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 PDK4Q16654 411 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 MUM1Q2TAK8 710 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 PRTGQ2VWP7 1150 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 DEFB109BQ30KR1 87 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 CDKL4Q5MAI5 379 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 NXPE4Q6UWF7 544 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 VN1R4Q7Z5H5 301 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 ASPGQ86U10 573 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 TBC1D19Q8N5T2 526 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 RHEBL1Q8TAI7 183 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 ZCCHC10Q8TBK6 192 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 COL26A1Q96A83 441 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 MTBPQ96DY7 904 aa15.11■□□□□ 0.01
RABGGTA-206ENST00000558649 GPR78Q96P69 363 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms