RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 FRYQ5TBA9 3013 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 URADA6NGE7 173 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 C21orf140B9A014 251 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 H3BQF6 201 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 COPEO14579 308 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 TAPBPO15533 448 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 CTSVO60911 334 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 ONECUT2O95948 504 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 C1GALT1C1LP0DN25 315 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 KRT4P19013 534 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 AGXTP21549 392 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 SERPINB1P30740 379 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 SLCO1A2P46721 670 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 GLRBP48167 497 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 SKP1P63208 163 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 CSNK1G2P78368 415 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 FAM53BQ14153 422 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 HIST2H2ACQ16777 129 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-234ENST00000557703 NDUFA9Q16795 377 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 PFKFB4Q16877 469 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 MUM1Q2TAK8 710 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 CRTC2Q53ET0 693 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-234ENST00000557703 HIST2H2AA3Q6FI13 130 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 PRMT9Q6P2P2 845 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 ADCK2Q7Z695 626 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 TRABD2AQ86V40 505 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 CAMKVQ8NCB2 501 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 NEIL2Q969S2 332 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 KIAA1143Q96AT1 154 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-234ENST00000557703 PTCD3Q96EY7 689 aaKnown RBP13.1□□□□□ -0.31
SHMT2-234ENST00000557703 PGM2Q96G03 612 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 CTRCQ99895 268 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 TMEM79Q9BSE2 394 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 GPR87Q9BY21 358 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 KLHL25Q9H0H3 589 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
SHMT2-234ENST00000557703 SSU72Q9NP77 194 aaKnown RBP13.1□□□□□ -0.31
SHMT2-234ENST00000557703 RRAGDQ9NQL2 400 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-234ENST00000557703 XPR1Q9UBH6 696 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 KCND3Q9UK17 655 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 CDC14AQ9UNH5 594 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 STK38LQ9Y2H1 464 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 ACTL7BQ9Y614 415 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 SDK2Q58EX2 2172 aa13.1□□□□□ -0.31
SHMT2-234ENST00000557703 MDC1Q14676 2089 aaKnown RBP13.09□□□□□ -0.31
SHMT2-234ENST00000557703 A0A0J9YVX5 310 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 UBXN8O00124 270 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 RGS16O15492 202 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-234ENST00000557703 PRPF4O43172 522 aaKnown RBP eCLIP13.09□□□□□ -0.31
SHMT2-234ENST00000557703 ZNF749O43361 778 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 RAD1O60671 282 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 RAB40ALP0C0E4 278 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 MYZAPP0CAP1 466 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 CDH1P12830 882 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 ATP5F1P24539 256 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-234ENST00000557703 HNF4AP41235 474 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 GCGRP47871 477 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 HSPA7P48741 367 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 MC1RQ01726 317 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 PRTGQ2VWP7 1150 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 KRT71Q3SY84 523 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 WASHC2DQ5SRD0 308 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 LIPJQ5W064 366 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 SLCO4C1Q6ZQN7 724 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 CACNA2D3Q8IZS8 1091 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 TMEM151AQ8N4L1 468 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 IL22RA1Q8N6P7 574 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 MFSD9Q8NBP5 474 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 NKD1Q969G9 470 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 UNKQ9C0B0 810 aaKnown RBP13.09□□□□□ -0.31
SHMT2-234ENST00000557703 IQCGQ9H095 443 aaKnown RBP13.09□□□□□ -0.31
SHMT2-234ENST00000557703 TXLNGQ9NUQ3 528 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 CUEDC1Q9NWM3 386 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-234ENST00000557703 IRAK4Q9NWZ3 460 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 ZFP69BQ9UJL9 534 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 TSC22D4Q9Y3Q8 395 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 ANGPTL3Q9Y5C1 460 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 ADAMTS20P59510 1910 aa13.09□□□□□ -0.31
SHMT2-234ENST00000557703 A0A1B0GX78 115 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 A0A1W2PPM1 405 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 H0YGG7 62 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 MEN1O00255 615 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 DSCR3O14972 297 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 TLX3O43711 291 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-234ENST00000557703 CCNT2O60583 730 aaKnown RBP13.08□□□□□ -0.32
SHMT2-234ENST00000557703 WFS1O76024 890 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 ALBP02768 609 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 SLC35G6P0C7Q6 338 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 RORAP35398 523 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 STAT5AP42229 794 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 GDF5P43026 501 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 SCTRP47872 440 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 VSX2P58304 361 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms