RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 VIPP01282 170 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 LCKP06239 509 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 PDHA2P29803 388 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 HNMTP50135 292 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 SLC35A2P78381 396 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 RAE1P78406 368 aaKnown RBP17.12■□□□□ 0.33
XRCC3-218ENST00000557439 ACSM2AQ08AH3 577 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 ACSM2BQ68CK6 577 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 GPR153Q6NV75 609 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 FAM180BQ6P0A1 224 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 AHSA2Q719I0 299 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 CPXM2Q8N436 756 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 WDR20Q8TBZ3 569 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 TRUB1Q8WWH5 349 aaKnown RBP17.12■□□□□ 0.33
XRCC3-218ENST00000557439 KRT84Q9NSB2 600 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 FZD4Q9ULV1 537 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 CCDC159P0C7I6 412 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 GPX2P18283 190 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 PRPH2P23942 346 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 KRT20P35900 424 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 TLE2Q04725 743 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 TOP3AQ13472 1001 aaPredicted RBP17.11■□□□□ 0.33
XRCC3-218ENST00000557439 IER5LQ5T953 404 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 TMEM215Q68D42 235 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 ANKRD13BQ86YJ7 626 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 OR4K1Q8NGD4 311 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 OR2A12Q8NGT7 310 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 CSGALNACT1Q8TDX6 532 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 FBLIM1Q8WUP2 373 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 FAM83DQ9H4H8 585 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 SGK2Q9HBY8 427 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 SH3BP4Q9P0V3 963 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 ITM2BQ9Y287 266 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 PCDHGA12O60330 932 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 FAM20BO75063 409 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 LEFTY1O75610 366 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 POP4O95707 220 aaKnown RBP17.11■□□□□ 0.33
XRCC3-218ENST00000557439 SLC16A8O95907 504 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 SEMG1P04279 462 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 DNAJA1P31689 397 aaKnown RBP17.11■□□□□ 0.33
XRCC3-218ENST00000557439 MVKQ03426 396 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 OCA2Q04671 838 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 NOGQ13253 232 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 AGTRAPQ6RW13 159 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 TCAIMQ8N3R3 496 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 OR52J3Q8NH60 311 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 CAPNS2Q96L46 248 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 KCNC2Q96PR1 638 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 DUSP26Q9BV47 211 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 HERC2P3Q9BVR0 1158 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 SH2B3Q9UQQ2 575 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 ERGIC3Q9Y282 383 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 AP3M1Q9Y2T2 418 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 TMED5Q9Y3A6 229 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 PPIL1Q9Y3C6 166 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 PMF1-BGLAPU3KQ54 211 aa17.11■□□□□ 0.33
XRCC3-218ENST00000557439 TTC34A8MYJ7 566 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 PCDH7O60245 1069 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 SULT1C4O75897 302 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 FPR1P21462 350 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 OR1E2P47887 323 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 SLC7A9P82251 487 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 IFITM3Q01628 133 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 RFX4Q33E94 735 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 ARSIQ5FYB1 569 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 COX20Q5RI15 118 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 CAPN13Q6MZZ7 669 aaPredicted RBP17.1■□□□□ 0.33
XRCC3-218ENST00000557439 GDPD4Q6W3E5 623 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 OTOP2Q7RTS6 562 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 TRIM74Q86UV6 250 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 NAGSQ8N159 534 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 DNAJB8Q8NHS0 232 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 SPG21Q9NZD8 308 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 TESMINQ9Y4I5 508 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 M0R129 80 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 LRG1P02750 347 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 ANXA4P09525 319 aaPredicted RBP17.1■□□□□ 0.33
XRCC3-218ENST00000557439 MPC1LP0DKB6 136 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 IL1RNP18510 177 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 ARHGDIAP52565 204 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 RPP38P78345 283 aaKnown RBP17.1■□□□□ 0.33
XRCC3-218ENST00000557439 MEF2AQ02078 507 aaPredicted RBP17.1■□□□□ 0.33
XRCC3-218ENST00000557439 CLCA4Q14CN2 919 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 MAD2L1BPQ15013 274 aaPredicted RBP17.1■□□□□ 0.33
XRCC3-218ENST00000557439 ZNF385BQ569K4 471 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 ZC3H12BQ5HYM0 836 aaKnown RBP17.1■□□□□ 0.33
XRCC3-218ENST00000557439 CBLL1Q75N03 491 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 DUSP21Q9H596 190 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 TBCCD1Q9NVR7 557 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 TRNAU1APQ9NX07 287 aaKnown RBP17.1■□□□□ 0.33
XRCC3-218ENST00000557439 STOX2Q9P2F5 926 aaPredicted RBP17.1■□□□□ 0.33
XRCC3-218ENST00000557439 SLC25A13Q9UJS0 675 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 ACSL6Q9UKU0 697 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 HCFC2Q9Y5Z7 792 aa17.1■□□□□ 0.33
XRCC3-218ENST00000557439 TMEM229AB2RXF0 380 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 WBP4O75554 376 aaKnown RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 GCM2O75603 506 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms