RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SERPINB5P36952 375 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 CASP2P42575 452 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SERPINB4P48594 390 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 MAPK10P53779 464 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 NAGLUP54802 743 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 PKNOX1P55347 436 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 ITGA1P56199 1179 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 CLDN6P56747 220 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 GABREP78334 506 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 PHEXP78562 749 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 REEP5Q00765 189 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 CLCQ05315 142 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 PCDH1Q08174 1060 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 LCP2Q13094 533 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 DOC2AQ14183 400 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SLBPQ14493 270 aaKnown RBP eCLIP7.32□□□□□ -1.24
TDP1-214ENST00000556063 GRM7Q14831 915 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 PCLAFQ15004 111 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 RBBP5Q15291 538 aaKnown RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 RBBP7Q16576 425 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.32□□□□□ -1.24
TDP1-214ENST00000556063 UNC50Q53HI1 259 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 MANEAQ5SRI9 462 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 ZNF678Q5SXM1 525 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 CATSPEREQ5SY80 951 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 C10orf62Q5T681 223 aaPredicted RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 YOD1Q5VVQ6 348 aaPredicted RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 LIPJQ5W064 366 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 FCRL6Q6DN72 434 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 MED27Q6P2C8 311 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 TLDC1Q6P9B6 456 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 TMIGD1Q6UXZ0 262 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SLCO4C1Q6ZQN7 724 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 RNF44Q7L0R7 432 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 MILR1Q7Z6M3 343 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 C10orf107Q8IVU9 208 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 KIRREL3Q8IZU9 778 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 DNAJC22Q8N4W6 341 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 ARFGAP2Q8N6H7 521 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 TTC29Q8NA56 475 aaPredicted RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 CAMKVQ8NCB2 501 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 ZNF483Q8TF39 744 aaPredicted RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 WDR34Q96EX3 536 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 CNDP1Q96KN2 507 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 PAIP2Q9BPZ3 127 aaKnown RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 NTMT1Q9BV86 223 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 DDA1Q9BW61 102 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SCNM1Q9BWG6 230 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SLC7A5P2Q9GIP4 190 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 NT5DC2Q9H857 520 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 NOL11Q9H8H0 719 aaKnown RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 EML4Q9HC35 981 aaKnown RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 FAM60AQ9NP50 221 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SEMA4BQ9NPR2 832 aaPredicted RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 ZNF446Q9NWS9 450 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 OCIAD1Q9NX40 245 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SIDT1Q9NXL6 827 aaKnown RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 ADGRE2Q9UHX3 823 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 PCTPQ9UKL6 214 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SATB2Q9UPW6 733 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 KLHL20Q9Y2M5 609 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 PCDHGA3Q9Y5H0 932 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 PCDHGA11Q9Y5H2 935 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 AK5Q9Y6K8 562 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 IGKV1-8A0A0C4DH67 115 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 TRABD2BA6NFA1 517 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 URADA6NGE7 173 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ANKDD1BA6NHY2 528 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 LRRC14BA6NHZ5 514 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 H0YGG7 62 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 AGRPO00253 132 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 NPHS1O60500 1241 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 CTSVO60911 334 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 CRCPO75575 148 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 WFS1O76024 890 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 SNUPNO95149 360 aaKnown RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 TNFSF15O95150 251 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 SERPINE1P05121 402 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 EIF2S1P05198 315 aaKnown RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 ENO1P06733 434 aaKnown RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 SLC35G6P0C7Q6 338 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 FGF3P11487 239 aaPredicted RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 FGF5P12034 268 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 CCL4P13236 92 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 GRK2P25098 689 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 VARSP26640 1264 aaKnown RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 CD82P27701 267 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ALDH3A1P30838 453 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ETV4P43268 484 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 SCTRP47872 440 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ARSFP54793 590 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 CDH13P55290 713 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 VSX2P58304 361 aaPredicted RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 ARF3P61204 181 aaPredicted RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 PPP2R2AP63151 447 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 SKP1P63208 163 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 YBX1P67809 324 aaKnown RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 SH3BP2P78314 561 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 RGS1Q08116 209 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 CYP4F3Q08477 520 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms