RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 NDUFA9Q16795 377 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
PCNX4-209ENST00000555569 STEAP4Q687X5 459 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 AGTRAPQ6RW13 159 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 MBOAT1Q6ZNC8 495 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 GPATCH11Q8N954 259 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 MMABQ96EY8 250 aaPredicted RBP13.13□□□□□ -0.31
PCNX4-209ENST00000555569 WDR83Q9BRX9 315 aaKnown RBP13.13□□□□□ -0.31
PCNX4-209ENST00000555569 SLC29A3Q9BZD2 475 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 LHPPQ9H008 270 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 DRC3Q9H069 523 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 ILKAPQ9H0C8 392 aaPredicted RBP13.13□□□□□ -0.31
PCNX4-209ENST00000555569 ZBTB20Q9HC78 741 aaPredicted RBP13.13□□□□□ -0.31
PCNX4-209ENST00000555569 C14orf105Q9NVL8 296 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 CORO1CQ9ULV4 474 aaPredicted RBP13.13□□□□□ -0.31
PCNX4-209ENST00000555569 TEX264Q9Y6I9 313 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 NAV2Q8IVL1 2488 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 A0A0A6YYC8 382 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 CCDC188H7C350 402 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 I3L1I5 382 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 FFAR3O14843 346 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 GPR42O15529 346 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 TTI1O43156 1089 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 FOXS1O43638 330 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 HPP00738 406 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 HIST1H2AGP0C0S8 130 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 HIST1H2ADP20671 130 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 CCND1P24385 295 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 EMP2P54851 167 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 IL2P60568 153 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 RPS15AP62244 130 aaKnown RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 NAE1Q13564 534 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 FAM53BQ14153 422 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 HECTD2Q5U5R9 776 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 AGAP7PQ5VUJ5 663 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 ATG9BQ674R7 924 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 FAM45BPQ6NSW5 357 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 TRMT10BQ6PF06 316 aaKnown RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 Q6ZS92 163 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 LAPTM4BQ86VI4 370 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 C17orf64Q86WR6 236 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 AMER3Q8N944 861 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 FAM45AQ8TCE6 357 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 C8orf44Q96CB5 159 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 SNRNP40Q96DI7 357 aaKnown RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 SNF8Q96H20 258 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 THOC3Q96J01 351 aaKnown RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 PDLIM2Q96JY6 352 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 HIST1H2AHQ96KK5 128 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 AGAP4Q96P64 663 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 HIST1H2AJQ99878 128 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 MESP1Q9BRJ9 268 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 H2AFJQ9BTM1 129 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 ATG10Q9H0Y0 220 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 MKKSQ9NPJ1 570 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-209ENST00000555569 PYCARDQ9ULZ3 195 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 SH2B3Q9UQQ2 575 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 VWA7Q9Y334 891 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 ICE1Q9Y2F5 2266 aa13.12□□□□□ -0.31
PCNX4-209ENST00000555569 KCNE1BA0A087WTH5 132 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 PABPN1LA6NDY0 278 aaKnown RBP13.11□□□□□ -0.31
PCNX4-209ENST00000555569 CYSRT1A8MQ03 144 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 IDSB3KWA1 339 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 TCP11X1B4DZS4 312 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 SEC31AO94979 1220 aaKnown RBP13.11□□□□□ -0.31
PCNX4-209ENST00000555569 TSPAN12O95859 305 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 STATHP02808 62 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 HEXBP07686 556 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 FDXRP22570 491 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 CXCR2P25025 360 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 CSNK1G2P78368 415 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 Q0VFX4 171 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 FRG1Q14331 258 aaKnown RBP13.11□□□□□ -0.31
PCNX4-209ENST00000555569 PHKG1Q16816 387 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 FHL5Q5TD97 284 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 LCTLQ6UWM7 567 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 IGFL2Q6UWQ7 119 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 VN1R4Q7Z5H5 301 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 ANKMY2Q8IV38 441 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 CISD2Q8N5K1 135 aaKnown RBP13.11□□□□□ -0.31
PCNX4-209ENST00000555569 PPP4R1Q8TF05 950 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 C19orf60Q96EN9 201 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 OLFM1Q99784 485 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 WDR77Q9BQA1 342 aaPredicted RBP13.11□□□□□ -0.31
PCNX4-209ENST00000555569 SGPP1Q9BX95 441 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 TRIM31Q9BZY9 425 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 TGIF2Q9GZN2 237 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 ZNF160Q9HCG1 818 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 RNF14Q9UBS8 474 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 SVILO95425 2214 aa13.11□□□□□ -0.31
PCNX4-209ENST00000555569 MAST4O15021 2626 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 SCN2AQ99250 2005 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 NSG1A0A0A6YYJ2 146 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 PCDH17O14917 1159 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 COX6A1P12074 109 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 CDH1P12830 882 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 AVPR1BP47901 424 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms