RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SERPINI1Q99574 410 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 TRMOQ9BU70 441 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CXorf56Q9H5V9 222 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ZNF385DQ9H6B1 395 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 UCK1Q9HA47 277 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 POPDC3Q9HBV1 291 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 IGSF5Q9NSI5 407 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ENTPD2Q9Y5L3 495 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 AK5Q9Y6K8 562 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CHD8Q9HCK8 2581 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 PIPSLA2A3N6 862 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 OR5K3A6NET4 321 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 E9PBE3 544 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 CDC7O00311 574 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 KDM1AO60341 852 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 KLHL41O60662 606 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 PSIP1O75475 530 aaKnown RBP9.51□□□□□ -0.89
PSEN1-213ENST00000555386 WISP3O95389 354 aaPredicted RBP9.51□□□□□ -0.89
PSEN1-213ENST00000555386 MATN4O95460 622 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 GUCA1CO95843 209 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 ZNF37AP17032 561 aaPredicted RBP9.51□□□□□ -0.89
PSEN1-213ENST00000555386 CDH3P22223 829 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 PIK3R1P27986 724 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 SHMT2P34897 504 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 GLRBP48167 497 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 MTTPP55157 894 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 MRPS35P82673 323 aaKnown RBP9.51□□□□□ -0.89
PSEN1-213ENST00000555386 COL9A2Q14055 689 aaPredicted RBP9.51□□□□□ -0.89
PSEN1-213ENST00000555386 CSHL1Q14406 222 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 C16orf72Q14CZ0 275 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 LSM12Q3MHD2 195 aaKnown RBP9.51□□□□□ -0.89
PSEN1-213ENST00000555386 TMEM71Q6P5X7 295 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 FRMD7Q6ZUT3 714 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 SLITRK4Q8IW52 837 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 FBXW8Q8N3Y1 598 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 POU5F2Q8N7G0 328 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 DCBLD1Q8N8Z6 715 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 OR4D9Q8NGE8 314 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 OR9A1PQ8NGU1 263 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 ZFPM2Q8WW38 1151 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 NRG4Q8WWG1 115 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 ASB11Q8WXH4 323 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 RAD51AP1Q96B01 352 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 ZDHHC12Q96GR4 267 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 TMEM74Q96NL1 305 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 OR52B2Q96RD2 323 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 PKP4Q99569 1192 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 MAP3K3Q99759 626 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 ACAT2Q9BWD1 397 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 STRADBQ9C0K7 418 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 VCX3BQ9H321 246 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 TFB2MQ9H5Q4 396 aaKnown RBP9.51□□□□□ -0.89
PSEN1-213ENST00000555386 SPHK1Q9NYA1 384 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 KLHL42Q9P2K6 505 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 BCAP29Q9UHQ4 241 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 ZDHHC2Q9UIJ5 367 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 IKZF3Q9UKT9 509 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 SATB2Q9UPW6 733 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 KLHL20Q9Y2M5 609 aa9.51□□□□□ -0.89
PSEN1-213ENST00000555386 TPRP12270 2363 aaKnown RBP9.51□□□□□ -0.89
PSEN1-213ENST00000555386 NCF1BA6NI72 391 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 NCF1CA8MVU1 366 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 IPO13O94829 963 aaKnown RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 TSPAN12O95859 305 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 CHRM5P08912 532 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 NCF1P14598 390 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 PVRP15151 417 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 ITIH1P19827 911 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 CYP2A7P20853 494 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 CD9P21926 228 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 PSMB5P28074 263 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 PKLRP30613 574 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 CSTF2P33240 577 aaKnown RBP eCLIP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 ARL4DP49703 201 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 RAB28P51157 221 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 MAPK10P53779 464 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 PRSS12P56730 875 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 SESN3P58005 492 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 NFKB2Q00653 900 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 TBL3Q12788 808 aaKnown RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 CUL3Q13618 768 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 CYLC2Q14093 348 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 FASTKQ14296 549 aaKnown RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 GRB7Q14451 532 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 KCNAB1Q14722 419 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 PHKG1Q16816 387 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 TUSC1Q2TAM9 212 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 THEMIS2Q5TEJ8 643 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 WDR74Q6RFH5 385 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 SUSD1Q6UWL2 747 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 NEK10Q6ZWH5 1172 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 FRA10AC1Q70Z53 315 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 RAB11FIP2Q7L804 512 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 ERMP1Q7Z2K6 904 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 SYTL1Q8IYJ3 562 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 ADGRF3Q8IZF5 1079 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 DEFB107AQ8IZN7 70 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 FBXO39Q8N4B4 442 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 RAB42Q8N4Z0 105 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms