RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ZNF350Q9GZX5 532 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 UBQLN3Q9H347 655 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 SRD5A3Q9H8P0 318 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 SLC52A3Q9NQ40 469 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 STK36Q9NRP7 1315 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 SMCHD1A6NHR9 2005 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 DCAF1Q9Y4B6 1507 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 TRAV18A0A075B6X5 111 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 A0A0B4J203 849 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 TRBV5-5A0A0J9YX44 114 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 PRSS46E5RG02 174 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 CTDSPLO15194 276 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 CRCPO75575 148 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 NADKO95544 446 aaPredicted RBP4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 SLC16A8O95907 504 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 GPIP06744 558 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 UMODP07911 640 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 PRSS56P0CW18 603 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 SSTR1P30872 391 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 CDKN1AP38936 164 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 DNA2P51530 1060 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 TEAD2Q15562 447 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 PRSS35Q8N3Z0 413 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 ZNF713Q8N859 430 aaPredicted RBP4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 OR7A2PQ8NGA2 310 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 PIK3R3Q92569 461 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 CCDC43Q96MW1 224 aaKnown RBP4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 TSSK2Q96PF2 358 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 C10orf88Q9H8K7 445 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 PHPT1Q9NRX4 125 aaPredicted RBP4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 CNIH4Q9P003 139 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 IL36AQ9UHA7 158 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 SLC12A6Q9UHW9 1150 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 GMEB2Q9UKD1 530 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 GPR132Q9UNW8 380 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 KLK4Q9Y5K2 254 aa4.84□□□□□ -1.63
CKS1BP1-201ENST00000555221 ACEP12821 1306 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 C13orf42A0A1B0GVH6 325 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 IFITM10A6NMD0 228 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 EXTL3O43909 919 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 TRMUO75648 421 aaKnown RBP4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 CDC123O75794 336 aaPredicted RBP4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 GOSR1O95249 250 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 ATP1B1P05026 303 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 FAM157CP0CG43 387 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 F3P13726 295 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 CYP2A7P20853 494 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 TRIM29Q14134 588 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 PRSS55Q6UWB4 352 aaPredicted RBP4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 TMEM207Q6UWW9 146 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 NHLRC1Q6VVB1 395 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 CROCCP3Q8IVE0 287 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 LSMEM2Q8N112 164 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 SLC37A3Q8NCC5 494 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 TRIM58Q8NG06 486 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 OR2T11Q8NH01 316 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 LPAR4Q99677 370 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 NACAP1Q9BZK3 213 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 THAP2Q9H0W7 228 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 RAVER2Q9HCJ3 691 aaKnown RBP4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 IARS2Q9NSE4 1012 aaKnown RBP4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 ITM2BQ9Y287 266 aa4.83□□□□□ -1.64
CKS1BP1-201ENST00000555221 SLCO1B7G3V0H7 640 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 AP2A2O94973 939 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 PAK4O96013 591 aaPredicted RBP4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 YES1P07947 543 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 SP9P0CG40 484 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 CD59P13987 128 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 KHKP50053 298 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 ARHGAP1Q07960 439 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 TEFQ10587 303 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 CETN1Q12798 172 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 HNRNPA0Q13151 305 aaKnown RBP4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 SGCGQ13326 291 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 RBM39Q14498 530 aaKnown RBP4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 SLC10A5Q5PT55 438 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 LRRC38Q5VT99 294 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 ZNF790Q6PG37 636 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 RAPH1Q70E73 1250 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 PRUNE1Q86TP1 453 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 APLFQ8IW19 511 aaPredicted RBP4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 FAM89BQ8N5H3 189 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 GPRC5AQ8NFJ5 357 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 OR4C15Q8NGM1 316 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 SDF2L1Q9HCN8 221 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 C2orf42Q9NWW7 574 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 NOCTQ9UK39 431 aaKnown RBP4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 AGTPBP1Q9UPW5 1226 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 LRP12Q9Y561 859 aa4.82□□□□□ -1.64
CKS1BP1-201ENST00000555221 IGHV4-4A0A075B6R2 117 aa4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 CCL24O00175 119 aa4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 FPGTO14772 594 aa4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 VTNP04004 478 aa4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 HMBSP08397 361 aa4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 PRKAR1AP10644 381 aa4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 UROSP10746 265 aa4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 HOXB6P17509 224 aaKnown RBP4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 ALDH1B1P30837 517 aa4.81□□□□□ -1.64
CKS1BP1-201ENST00000555221 CHRNB4P30926 498 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms