RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PSMD11O00231 422 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 KLHL41O60662 606 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 PRAMEF11O60813 436 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 PALMO75781 387 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 HEXIM1O94992 359 aaKnown RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 SPDEFO95238 335 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 RASAL1O95294 804 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 FGFR1OPO95684 399 aaKnown RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 EML2O95834 649 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CSTBP04080 98 aaKnown RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 PYGLP06737 847 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CYP2A6P11509 494 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CYP11B1P15538 503 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 AMD1P17707 334 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 EPHB2P29323 1055 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 SDC4P31431 198 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 GPR1P46091 355 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 RENBPP51606 427 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 VAV2P52735 878 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 AP1S1P61966 158 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 PDE1BQ01064 536 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CDK18Q07002 472 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CHAF1BQ13112 559 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 TP53BP2Q13625 1128 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 BLMHQ13867 455 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 BECN1Q14457 450 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 RFTN1Q14699 578 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 KIR2DS5Q14953 304 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CNGA3Q16281 694 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 PFKFB4Q16877 469 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 SPDYE7PQ495Y7 208 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CCDC14Q49A88 953 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CCDC38Q502W7 563 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 RBM20Q5T481 1227 aaKnown RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CACHD1Q5VU97 1274 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 RAET1GQ6H3X3 334 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 TRNP1Q6NT89 227 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 TTI2Q6NXR4 508 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 TLDC1Q6P9B6 456 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 FBXO38Q6PIJ6 1188 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 TRIM65Q6PJ69 517 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 DOK6Q6PKX4 331 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 GBP6Q6ZN66 633 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 MARK2Q7KZI7 788 aaKnown RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 STRADAQ7RTN6 431 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 SLFN11Q7Z7L1 901 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 FAM71AQ8IYT1 594 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 FAM109AQ8N4B1 249 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 ARFGAP1Q8N6T3 406 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 FDCSPQ8NFU4 85 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 RXFP2Q8WXD0 754 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 LINC00476Q8WZB0 136 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CENPIQ92674 756 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 SMARCE1Q969G3 411 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 NTAN1Q96AB6 310 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 DTD2Q96FN9 168 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 ZDHHC12Q96GR4 267 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 LURAP1Q96LR2 239 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 RANBP9Q96S59 729 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 BARD1Q99728 777 aaKnown RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CRACR2AQ9BSW2 395 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 TBC1D10AQ9BXI6 508 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CATSPERBQ9H7T0 1116 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 UCK1Q9HA47 277 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 PDFQ9HBH1 243 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 GALNT9Q9HCQ5 603 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 OBP2BQ9NPH6 170 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 NECTIN3Q9NQS3 549 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 AGPAT4Q9NRZ5 378 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 CNOT8Q9UFF9 292 aaKnown RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 TBC1D29Q9UFV1 150 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 ZNHIT2Q9UHR6 403 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 PACSIN3Q9UKS6 424 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 NEU3Q9UQ49 428 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 COPG1Q9Y678 874 aaKnown RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 EPN1Q9Y6I3 576 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-228ENST00000554592 MN1Q10571 1320 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 RP1L1Q8IWN7 2480 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 ESPL1Q14674 2120 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 A0A1B0GUH1 482 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 ARHGAP42A6NI28 874 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 LILRA5A6NI73 299 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 A6NL46 340 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 AQP7P3A6NL99 342 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 C2CD4BA6NLJ0 364 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 LGALS16A8MUM7 142 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PRSS44E7EML9 344 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 TRIAP1O43715 76 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 SNX2O60749 519 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 SKAP2O75563 359 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM63AO94886 807 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 LSM8O95777 96 aaKnown RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 VIPP01282 170 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 EGR2P11161 476 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 F3P13726 295 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 NELFEP18615 380 aaKnown RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 XRCC1P18887 633 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PON1P27169 355 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PPIFP30405 207 aaKnown RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 HTR7P34969 479 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms