RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 AGTRAPQ6RW13 159 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 LCTLQ6UWM7 567 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 IGFL3Q6UXB1 125 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ADCK2Q7Z695 626 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 SLC26A11Q86WA9 606 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ATCAYQ86WG3 371 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 CCDC25Q86WR0 208 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 C17orf64Q86WR6 236 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ANKMY2Q8IV38 441 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 GPATCH11Q8N954 259 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 FBXO36Q8NEA4 188 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 FBXO25Q8TCJ0 367 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 STT3BQ8TCJ2 826 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ATL1Q8WXF7 558 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ANKRD7Q92527 254 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 MIB2Q96AX9 1013 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 MIEF2Q96C03 454 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 LINGO1Q96FE5 620 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 C10orf90Q96M02 699 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 PRAP1Q96NZ9 151 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 HAUS8Q9BT25 410 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 CRB3Q9BUF7 120 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 FAM129AQ9BZQ8 928 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ZNF552Q9H707 407 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ABCF3Q9NUQ8 709 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 CUEDC1Q9NWM3 386 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 MOCS1Q9NZB8 636 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 RUVBL1Q9Y265 456 aaKnown RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 MAU2Q9Y6X3 613 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 FLNBO75369 2602 aaKnown RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 DOPEY2Q9Y3R5 2298 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 H0YIG0 161 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 PCDH17O14917 1159 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 HAT1O14929 419 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 MED26O95402 600 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 TSPAN12O95859 305 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 ANXA5P08758 320 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 ZGLP1P0C6A0 271 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 SLC26A3P40879 764 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 AVPR1BP47901 424 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 FOXL2P58012 376 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 KLC1Q07866 573 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 NAE1Q13564 534 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 DSG2Q14126 1118 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 HKDC1Q2TB90 917 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 TUBB8Q3ZCM7 444 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 NADK2Q4G0N4 442 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 IRAK1BP1Q5VVH5 260 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 CAPN13Q6MZZ7 669 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 JMJD6Q6NYC1 403 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 KIRREL2Q6UWL6 708 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 ZDHHC24Q6UX98 284 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 STRA8Q7Z7C7 330 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 SPNS2Q8IVW8 549 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 IFT20Q8IY31 132 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 ZBED8Q8IZ13 594 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 NKAPQ8N5F7 415 aaKnown RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 METTL27Q8N6F8 245 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 EFCAB3Q8N7B9 438 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 RBMXL3Q8N7X1 1067 aaKnown RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 CAMKVQ8NCB2 501 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 CPT1CQ8TCG5 803 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 TM9SF4Q92544 642 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 PNPLA2Q96AD5 504 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 MMABQ96EY8 250 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 OLFM1Q99784 485 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 WDR83Q9BRX9 315 aaKnown RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 YIPF2Q9BWQ6 316 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 SGPP1Q9BX95 441 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 TGIF2Q9GZN2 237 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 DRC3Q9H069 523 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 ATG10Q9H0Y0 220 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 SAYSD1Q9NPB0 183 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 MKKSQ9NPJ1 570 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 SLAMF7Q9NQ25 335 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 C14orf105Q9NVL8 296 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 ARL15Q9NXU5 204 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 SLC17A6Q9P2U8 582 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 CTSFQ9UBX1 484 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 MTRF1LQ9UGC7 380 aaKnown RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 C3orf18Q9UK00 162 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 FBXL4Q9UKA2 621 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 NOVA2Q9UNW9 492 aaKnown RBP8.3□□□□□ -1.08
ACTN1-213ENST00000554508 HS3ST3B1Q9Y662 390 aa8.3□□□□□ -1.08
ACTN1-213ENST00000554508 UBR5O95071 2799 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-213ENST00000554508 FAM95CA0A1B0GW59 222 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 FOXS1O43638 330 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 SORBS2O94875 1100 aaKnown RBP8.29□□□□□ -1.08
ACTN1-213ENST00000554508 NPPBP16860 134 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 CXCR2P25025 360 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 ITGA3P26006 1051 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 EMP2P54851 167 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 CSNK1G2P78368 415 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 RAPSNQ13702 412 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 FASTKD3Q14CZ7 662 aaKnown RBP8.29□□□□□ -1.08
ACTN1-213ENST00000554508 PHKG1Q16816 387 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 VWA2Q5GFL6 755 aa8.29□□□□□ -1.08
ACTN1-213ENST00000554508 COLEC12Q5KU26 742 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms