RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TRMT61BQ9BVS5 477 aaKnown RBP11.3□□□□□ -0.6
SHMT2-212ENST00000554467 IKZF5Q9H5V7 419 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 GIN1Q9NXP7 522 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 VAPAQ9P0L0 249 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 MUC22E2RYF6 1773 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-212ENST00000554467 A6NL46 340 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 FAM47E-STBD1D6RA91 191 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 H0Y858 1186 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 APODP05090 189 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 ZNF182P17025 639 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-212ENST00000554467 AP1S2P56377 157 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 SP140Q13342 867 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 CST6Q15828 149 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 CATSPEREQ5SY80 951 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 PHACTR4Q8IZ21 702 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 GPR156Q8NFN8 814 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 HCAR2Q8TDS4 363 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 ZNF480Q8WV37 535 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 GLMNQ92990 594 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 TAMM41Q96BW9 452 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 SEPHS2Q99611 448 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 EFHD1Q9BUP0 239 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 MKRN2Q9H000 416 aaKnown RBP11.3□□□□□ -0.6
SHMT2-212ENST00000554467 EHD1Q9H4M9 534 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 CLK4Q9HAZ1 481 aaKnown RBP11.3□□□□□ -0.6
SHMT2-212ENST00000554467 FZD3Q9NPG1 666 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 NFKBIL1Q9UBC1 381 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-212ENST00000554467 SNX6Q9UNH7 406 aa11.3□□□□□ -0.6
SHMT2-212ENST00000554467 PSMD11O00231 422 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 SAP18O00422 153 aaKnown RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 ETHE1O95571 254 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 GBAP04062 536 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 S100A1P23297 94 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 GSSP48637 474 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 VASPP50552 380 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 PHC1P78364 1004 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 KIAA0040Q15053 153 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 WSCD2Q2TBF2 565 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 TMEM31Q5JXX7 168 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 AGBL4Q5VU57 503 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 CES5AQ6NT32 575 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 DSG4Q86SJ6 1040 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 TMPRSS11BQ86T26 416 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 FAM124AQ86V42 546 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 NLRP8Q86W28 1048 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 ADAMTS16Q8TE57 1224 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 NEIL2Q969S2 332 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 FOPNLQ96NB1 174 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 CXorf21Q9HAI6 301 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 TRIM39Q9HCM9 518 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 ZNF701M0R085 212 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 C1orf105O95561 183 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 GTF2H3Q13889 308 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 INPP5AQ14642 412 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 MOGQ16653 247 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 USP39Q53GS9 565 aaKnown RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 NHSL2Q5HYW2 709 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 HMBOX1Q6NT76 420 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 IGFN1Q86VF2 1251 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 ZC3H7AQ8IWR0 971 aaKnown RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 TCAIMQ8N3R3 496 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 OR5AR1Q8NGP9 310 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 OR2T34Q8NGX1 318 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 OR2T3Q8NH03 318 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 SLC13A3Q8WWT9 602 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 OR52E6Q96RD3 313 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 SLC29A3Q9BZD2 475 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 NDEL1Q9GZM8 345 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 SOX17Q9H6I2 414 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 CD93Q9NPY3 652 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 PNPLA3Q9NST1 481 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 DLGAP1O14490 977 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 SLC16A5O15375 505 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 PAPLNO95428 1278 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 PGRP06401 933 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 JAK1P23458 1154 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 TBPL1P62380 186 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 COL9A2Q14055 689 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 MAPKAPK3Q16644 382 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 IER5LQ5T953 404 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 OFCC1Q8IZS5 231 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 CBR4Q8N4T8 237 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 ZBTB18Q99592 522 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 INPP5KQ9BT40 448 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 THUMPD3Q9BV44 507 aaKnown RBP11.29□□□□□ -0.6
SHMT2-212ENST00000554467 MOSPD1Q9UJG1 213 aa11.29□□□□□ -0.6
SHMT2-212ENST00000554467 TCRBV3S1A0A5B6 114 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 K7EQS6 105 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 SDC1P18827 310 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 DCKP27707 260 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 DMPKQ09013 629 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 RAB39AQ14964 217 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 CYP51A1Q16850 503 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 RGS21Q2M5E4 152 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 FAM209AQ5JX71 171 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 Q8N9G6 341 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms