RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 PWWP2AQ96N64 755 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 NUDT9Q9BW91 350 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 FAM129AQ9BZQ8 928 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 TRIM31Q9BZY9 425 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 TMEM184CQ9NVA4 438 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 NSMCE4AQ9NXX6 385 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 MOCS1Q9NZB8 636 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 WHRNQ9P202 907 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZFATQ9P243 1243 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 CTSFQ9UBX1 484 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 ADAMTS6Q9UKP5 1117 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 RUVBL1Q9Y265 456 aaKnown RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 VWA7Q9Y334 891 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 SHANK1Q9Y566 2161 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 CNTRLQ7Z7A1 2325 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 PRRC2CQ9Y520 2896 aaKnown RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 PABPN1LA6NDY0 278 aaKnown RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 PCDH17O14917 1159 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 EIF3HO15372 352 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 MED26O95402 600 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 EIF2S1P05198 315 aaKnown RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 HIST1H2AGP0C0S8 130 aaPredicted RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 HIST1H2ADP20671 130 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 FBLP22087 321 aaKnown RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 OR1D4P47884 311 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 CD97P48960 835 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 RPS15AP62244 130 aaKnown RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 ETF1P62495 437 aaKnown RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 OCA2Q04671 838 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 CALCOCO2Q13137 446 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 AIMP2Q13155 320 aaKnown RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 FAM53BQ14153 422 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 HP1BP3Q5SSJ5 553 aaPredicted RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 AGTRAPQ6RW13 159 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 LCTLQ6UWM7 567 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 IGFL3Q6UXB1 125 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZC3HC1Q86WB0 502 aaKnown RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 C17orf64Q86WR6 236 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 ANKMY2Q8IV38 441 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 GALNT16Q8N428 558 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 GPATCH11Q8N954 259 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 FBXO36Q8NEA4 188 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 STT3BQ8TCJ2 826 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 ATL1Q8WXF7 558 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 MIB2Q96AX9 1013 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 HIST1H2AHQ96KK5 128 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 HIST1H2AJQ99878 128 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 ERP44Q9BS26 406 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 H2AFJQ9BTM1 129 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 SGPP1Q9BX95 441 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 TRIM54Q9BYV2 358 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 PHACTR1Q9C0D0 580 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 ATP13A2Q9NQ11 1180 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 C14orf105Q9NVL8 296 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 CUEDC1Q9NWM3 386 aaPredicted RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 SLC17A6Q9P2U8 582 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZNF282Q9UDV7 671 aaPredicted RBP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 CDC23Q9UJX2 597 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 SNX24Q9Y343 169 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 HS3ST3B1Q9Y662 390 aa9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTCD2P1-201ENST00000554393 A0A1W2PQ72 361 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 A6NL46 340 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 H7BY64 318 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 SOCS6O14544 535 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 HAT1O14929 419 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 SORBS2O94875 1100 aaKnown RBP9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZGLP1P0C6A0 271 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZNF37AP17032 561 aaPredicted RBP9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 VARSP26640 1264 aaKnown RBP9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 CASQ1P31415 396 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 FASTKD3Q14CZ7 662 aaKnown RBP9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 RBBP7Q16576 425 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 NDUFA9Q16795 377 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 PHKG1Q16816 387 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 HKDC1Q2TB90 917 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 TUBB8Q3ZCM7 444 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 DUPD1Q68J44 220 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 CAPN13Q6MZZ7 669 aaPredicted RBP9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 KIRREL2Q6UWL6 708 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 CYS1Q717R9 158 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZNF572Q7Z3I7 529 aaPredicted RBP9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 ADCK2Q7Z695 626 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 STRA8Q7Z7C7 330 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZBED8Q8IZ13 594 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 METTL27Q8N6F8 245 aaPredicted RBP9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 OR56A3Q8NH54 315 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 TM9SF4Q92544 642 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 MIEF2Q96C03 454 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 FBXL8Q96CD0 374 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 PRAP1Q96NZ9 151 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 OLFM1Q99784 485 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 HAUS8Q9BT25 410 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 MCMBPQ9BTE3 642 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 CRB3Q9BUF7 120 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 TGIF2Q9GZN2 237 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 DRC3Q9H069 523 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 RHOJQ9H4E5 214 aa9.9□□□□□ -0.82
PTCD2P1-201ENST00000554393 SYNPO2LQ9H987 977 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms