RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 VIPP01282 170 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 HTR7P34969 479 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 HNF4AP41235 474 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 CRISP3P54108 245 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 ZNF551Q7Z340 670 aaPredicted RBP16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 ADGRG2Q8IZP9 1017 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 NKAPQ8N5F7 415 aaKnown RBP16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 MAP6Q96JE9 813 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 RIPOR3Q96MK2 946 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 ZNF382Q96SR6 550 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 ARHGAP39Q9C0H5 1083 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 GPRC5BQ9NZH0 403 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 IGLV3-10A0A075B6K4 115 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 C12orf71A8MTZ7 269 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 TEX28O15482 410 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 UGT2B17O75795 530 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 IL7P13232 177 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 TNFSF8P32971 234 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 CYP4F2P78329 520 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 NPRL3Q12980 569 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 SLC7A6Q92536 515 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 ROGDIQ9GZN7 287 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 PSORS1C1Q9UIG5 152 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 DNMT3LQ9UJW3 386 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 PCDHGB2Q9Y5G2 931 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 FAM220BPB1ANY3 271 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 ANKRD66B4E2M5 251 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 SLITRK5O94991 958 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 HSMCR30P0CW71 290 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 IL1RNP18510 177 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 DNAJA1P31689 397 aaKnown RBP16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 TP53BP2Q13625 1128 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 ARMCX4Q5H9R4 360 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 MORN1Q5T089 497 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 PRSS55Q6UWB4 352 aaPredicted RBP16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 LSRQ86X29 649 aaPredicted RBP16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 GPR63Q9BZJ6 419 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 WWOXQ9NZC7 414 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 MUTYHQ9UIF7 546 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 SPEF1Q9Y4P9 236 aa16.41■□□□□ 0.22
PPP4R3A-202ENST00000554390 KIAA0513O60268 411 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 KLKB1P03952 638 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 FPR1P21462 350 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 CTGFP29279 349 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 CD83Q01151 205 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 CYP27C1Q4G0S4 372 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 GPAT3Q53EU6 434 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 ZMAT1Q5H9K5 638 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 TMEM173Q86WV6 379 aaPredicted RBP16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 FAM109AQ8N4B1 249 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 SETD6Q8TBK2 473 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 PRRG3Q9BZD7 231 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 MKRN2Q9H000 416 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 RUBCNLQ9H714 662 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 SIRT5Q9NXA8 310 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 KLHL20Q9Y2M5 609 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 RGS6P49758 472 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 CLCN7P51798 805 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 LIMK1P53667 647 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 FCHO2Q0JRZ9 810 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 RNF219Q5W0B1 726 aaPredicted RBP16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 ATG9BQ674R7 924 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 GGHQ92820 318 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 SNAPC3Q92966 411 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 SAMHD1Q9Y3Z3 626 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 PCDHB5Q9Y5E4 795 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 PCDHGA6Q9Y5G7 932 aa16.4■□□□□ 0.22
PPP4R3A-202ENST00000554390 ANKRD36A6QL64 1941 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 ADAM12O43184 909 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 SLC25A14O95258 325 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 PKLRP30613 574 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 GZMMP51124 257 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 CSNK2BP67870 215 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TAF1AQ15573 450 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 USP50Q70EL3 339 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TAS1R1Q7RTX1 841 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 SERINC5Q86VE9 423 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 CALHM3Q86XJ0 350 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 ST13P5Q8NFI4 369 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 MYDGFQ969H8 173 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TBC1D20Q96BZ9 403 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 PITX2Q99697 317 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 FBXO44Q9H4M3 255 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 IL1RAPQ9NPH3 570 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TRAPPC4Q9Y296 219 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 A0A1W2PQ72 361 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 RGS5O15539 181 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 CELF2O95319 508 aaKnown RBP16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 PTHP01270 115 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 CDK1P06493 297 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 ASGR1P07306 291 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TRAPPC2P0DI81 140 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TRAPPC2BP0DI82 140 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 ADORA3P0DMS8 318 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TNFRSF1BP20333 461 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 AZGP1P25311 298 aaKnown RBP16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TIE1P35590 1138 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 NUDT6P53370 316 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms