RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RBM39Q14498 530 aaKnown RBP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 KLHL10Q6JEL2 608 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 TTC27Q6P3X3 843 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 PLBD1Q6P4A8 553 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 TMEM270Q6UE05 265 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 TMEM207Q6UWW9 146 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 SH2D5Q6ZV89 423 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 G2E3Q7L622 706 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 TRMT1LQ7Z2T5 733 aaKnown RBP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 APLFQ8IW19 511 aaPredicted RBP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 CCDC60Q8IWA6 550 aaPredicted RBP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 DCUN1D3Q8IWE4 304 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 RCOR2Q8IZ40 523 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 SAP25Q8TEE9 199 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 RBM41Q96IZ5 413 aaKnown RBP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 CABS1Q96KC9 395 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 INPP4AQ96PE3 977 aaPredicted RBP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 ZNF71Q9NQZ8 489 aaPredicted RBP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 MAN1B1Q9UKM7 699 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 PPP2R2CQ9Y2T4 447 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 PCDHGA1Q9Y5H4 931 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 SNX5Q9Y5X3 404 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 ACEP12821 1306 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 IL16Q14005 1332 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 A0A0A6YYC8 382 aaPredicted RBP4.6□□□□□ -1.67
SYNE2-210ENST00000553455 A0A1W2PRV1 198 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 SMIM30A4D0T7 59 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 MTMR11A4FU01 709 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 IFITM10A6NMD0 228 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 PMS2P5A8MQ11 134 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 ERVV-2B6SEH9 535 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 H3BMM5 538 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 I3L1I5 382 aaPredicted RBP4.6□□□□□ -1.67
SYNE2-210ENST00000553455 GLCEO94923 617 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 SP9P0CG40 484 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 FAM157CP0CG43 387 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 C8orf89P0DMQ9 161 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 SSTR1P30872 391 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 SFTPDP35247 375 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 MAGEA11P43364 429 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 LASP1Q14847 261 aaKnown RBP4.6□□□□□ -1.67
SYNE2-210ENST00000553455 OPCMLQ14982 345 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 FAM53AQ6NSI3 398 aaPredicted RBP4.6□□□□□ -1.67
SYNE2-210ENST00000553455 FUT10Q6P4F1 479 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 ANKRD46Q86W74 232 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 NR2C2APQ86WQ0 139 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 CCDC83Q8IWF9 413 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 MARVELD2Q8N4S9 558 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 KIAA0895Q8NCT3 520 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 OR1L3Q8NH93 324 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 DYRK2Q92630 601 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 KRT35Q92764 455 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 GIMAP5Q96F15 307 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 PDLIM5Q96HC4 596 aaKnown RBP4.6□□□□□ -1.67
SYNE2-210ENST00000553455 C10orf90Q96M02 699 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 MRPL9Q9BYD2 267 aaKnown RBP4.6□□□□□ -1.67
SYNE2-210ENST00000553455 UBQLN3Q9H347 655 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 ATP13A3Q9H7F0 1226 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 PNPLA3Q9NST1 481 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 TMEM161AQ9NX61 479 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 OR6C2Q9NZP2 312 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 ICAM5Q9UMF0 924 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 STK36Q9NRP7 1315 aa4.6□□□□□ -1.67
SYNE2-210ENST00000553455 TRAV18A0A075B6X5 111 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 A0A0G2JLW4 131 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 TRIM64A6NGJ6 449 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 TRIM64BA6NI03 449 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 MSGN1A6NI15 193 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 SNURFLB1AK76 121 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 NPIPA3F8WFD2 350 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 BLOC1S5-TXNDC5H3BN57 136 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 RTN2O75298 545 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 TRMUO75648 421 aaKnown RBP4.59□□□□□ -1.67
SYNE2-210ENST00000553455 ZNF432O94892 652 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 CAVIN2O95810 425 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 PRSS56P0CW18 603 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 CYP2A7P20853 494 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 CASP3P42574 277 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 DNA2P51530 1060 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 GTDC1Q4AE62 458 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 LCN1P1Q5VSP4 162 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 ARHGEF16Q5VV41 709 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 OR4C11Q6IEV9 310 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 CROCCP3Q8IVE0 287 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 TDHQ8IZJ6 230 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 SPC24Q8NBT2 197 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 SLC37A3Q8NCC5 494 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 OR7A2PQ8NGA2 310 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 CKAP2Q8WWK9 683 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 BCL2L2Q92843 193 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-210ENST00000553455 WBP2Q969T9 261 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 PGLYRP2Q96PD5 576 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 TSSK2Q96PF2 358 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 PANX3Q96QZ0 392 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 RASL10BQ96S79 203 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 CDCA3Q99618 268 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-210ENST00000553455 EPYCQ99645 322 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 SLC5A7Q9GZV3 580 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms