RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TSNARE1Q96NA8 513 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 OR2A5Q96R48 311 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 DHRS4Q9BTZ2 278 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 NUDT4Q9NZJ9 180 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 SLC22A14Q9Y267 594 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 HMX2A2RU54 273 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 KERAO60938 352 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 ALDOAP04075 364 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 GMPRP36959 345 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 NDUFA9Q16795 377 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 ZXDCQ2QGD7 858 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 PRTGQ2VWP7 1150 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 TMPRSS11BQ86T26 416 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 METTL27Q8N6F8 245 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 EXTL1Q92935 676 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 NXNL1Q96CM4 212 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 OR4K3Q96R72 315 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 CCDC77Q9BR77 488 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 ENAMQ9NRM1 1142 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 IGSF5Q9NSI5 407 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 POLHQ9Y253 713 aa17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 RUVBL1Q9Y265 456 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-216ENST00000552301 FER1L5A0AVI2 2057 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 FEZF1A0PJY2 475 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 CCDC189A1A4V9 331 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 EIF4E1BA6NMX2 242 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 SYCE1LA8MT33 242 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 TRIM49D1C9J1S8 452 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 RECKO95980 971 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 SNRPAP09012 282 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 GCGRP47871 477 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 GLRBP48167 497 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 EMP3P54852 163 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 IRF9Q00978 393 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 DLG1Q12959 904 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 DEFB109BQ30KR1 87 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 ATP1A1-AS1Q5TC04 95 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 GARNL3Q5VVW2 1013 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 PRMT9Q6P2P2 845 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 BORAQ6PGQ7 559 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 ISCA2Q86U28 154 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 CENPLQ8N0S6 344 aaPredicted RBP17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 CAMKVQ8NCB2 501 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 PDPRQ8NCN5 879 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 ABHD11Q8NFV4 315 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 DCAKDQ8WVC6 231 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 UBLCP1Q8WVY7 318 aaPredicted RBP17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 NEIL2Q969S2 332 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 AIF1LQ9BQI0 150 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 TXLNGYQ9BZA5 131 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 PELI2Q9HAT8 420 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 TCFL5Q9UL49 500 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 CDC14AQ9UNH5 594 aa17.63■□□□□ 0.41
PRPF40B-216ENST00000552301 PRPF4O43172 522 aaKnown RBP eCLIP17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 OR1F1O43749 312 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 KLHL2O95198 593 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 CAPN1P07384 714 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 SLC35G6P0C7Q6 338 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 MYBL2P10244 700 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 BCL6P41182 706 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 FOLR3P41439 243 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 CCR10P46092 362 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 SLC6A12P48065 614 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 HSPA7P48741 367 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 CDC16Q13042 620 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 SLC29A2Q14542 456 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 TBR1Q16650 682 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 HKDC1Q2TB90 917 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 C18orf21Q32NC0 220 aaPredicted RBP17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 CATSPEREQ5SY80 951 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 ASPGQ86U10 573 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 CNPY4Q8N129 248 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 SNX31Q8N9S9 440 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 MFSD9Q8NBP5 474 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 TTC9Q92623 222 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 COL26A1Q96A83 441 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 FKBP10Q96AY3 582 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 C10orf90Q96M02 699 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 CAPS2Q9BXY5 557 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 ANKZF1Q9H8Y5 726 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 DNAJC11Q9NVH1 559 aa17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 PTRH2Q9Y3E5 179 aaKnown RBP17.62■□□□□ 0.41
PRPF40B-216ENST00000552301 CACNA1GO43497 2377 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 KCNE1BA0A087WTH5 132 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 IQANK1A0A1B0GTG1 560 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 TRBC2A0A5B9 178 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 UBXN8O00124 270 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 ATXN7O15265 892 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 P2RX6O15547 441 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 STK16O75716 305 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 STATHP02808 62 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 GNAZP19086 355 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 FBLP22087 321 aaKnown RBP17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 CXCR2P25025 360 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 GDF5P43026 501 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 OR1D4P47884 311 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 NFKB2Q00653 900 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 MEF2AQ02078 507 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 ACAP2Q15057 778 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms