RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 NSMCE4AQ9NXX6 385 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 GRHL1Q9NZI5 618 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 EHD2Q9NZN4 543 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 KIAA1456Q9P272 454 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CGNQ9P2M7 1197 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 GGA2Q9UJY4 613 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 NOL7Q9UMY1 257 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SCML1Q9UN30 329 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PCDHA7Q9UN72 937 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ERVW-1Q9UQF0 538 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 HS3ST2Q9Y278 367 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 HBS1LQ9Y450 684 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PCDHGB5Q9Y5G0 923 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CLDN16Q9Y5I7 305 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 LYVE1Q9Y5Y7 322 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CSNK1G3Q9Y6M4 447 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 HIVEP3Q5T1R4 2406 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SPG11Q96JI7 2443 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 UBE4BO95155 1302 aa2.34□□□□□ -2.04
CPSF6-207ENST00000551516 ARHGEF17Q96PE2 2063 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 RP1P56715 2156 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 A0A096LPK6 155 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CXorf51AA0A1B0GTR3 108 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 A6NCN8 305 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NPIPB15A6NHN6 443 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 LRRC53A6NM62 1247 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 C17orf100A8MU93 164 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 EIF3CLB5ME19 914 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FAM157AC9JC47 383 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 XPO1O14980 1071 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NVLO15381 856 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 PRPF4O43172 522 aaKnown RBP eCLIP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SLC7A4O43246 635 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SMAD6O43541 496 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DOK2O60496 412 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 HNRNPCL1O60812 293 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TBCAO75347 108 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 PTP4A3O75365 173 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TSPAN9O75954 239 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NEURL1O76050 574 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TMCC1O94876 653 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 YEATS4O95619 227 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 LDOC1O95751 146 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DDAH2O95865 285 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FSHBP01225 129 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TNNC2P02585 160 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 AFPP02771 609 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NR3C1P04150 777 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SRPRAP08240 638 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 KRT19P08727 400 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM191BP0C7N4 346 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FAM200BP0CF97 657 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NHLRC4P0CG21 123 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM49P0CI25 452 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM49CP0CI26 452 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SLC2A4P14672 509 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF8P17098 575 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 GTF2H1P32780 548 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM23P36406 574 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ACVRL1P37023 503 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ETV5P41161 510 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 VAMP7P51809 220 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TKTL1P51854 596 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 AP3M2P53677 418 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ARSFP54793 590 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 YWHAGP61981 247 aaKnown RBP eCLIP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 YPEL5P62699 121 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SEMG2Q02383 582 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 PMPCAQ10713 525 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CNTN1Q12860 1018 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SLC10A2Q12908 348 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM29Q14134 588 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ELAVL3Q14576 367 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DRAP1Q14919 205 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NR1D2Q14995 579 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 RABEP1Q15276 862 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ZRSR1Q15695 479 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 RPE65Q16518 533 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 MEA1Q16626 185 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF699Q32M78 642 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 MPPE1Q53F39 396 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DCAF6Q58WW2 860 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF667Q5HYK9 610 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 C10orf120Q5SQS8 335 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CFAP58Q5T655 872 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SERTAD4-AS1Q5TG53 156 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SEL1L3Q68CR1 1132 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF776Q68DI1 518 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 HIST2H2BCQ6DN03 193 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ISM2Q6H9L7 571 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FBXL22Q6P050 247 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CDC73Q6P1J9 531 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 GUSBP11Q6P575 273 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CCDC73Q6ZRK6 1079 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 IKBIPQ70UQ0 350 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FAM57BQ71RH2 274 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SLC46A3Q7Z3Q1 461 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 GPAT4Q86UL3 456 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TAC4Q86UU9 113 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NLRP14Q86W24 1093 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms