RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ISLR2Q6UXK2 745 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 PACS1Q6VY07 963 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 NEK10Q6ZWH5 1172 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TICAM1Q8IUC6 712 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TMTC1Q8IUR5 882 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CNGA4Q8IV77 575 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 KLHDC8BQ8IXV7 354 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 MPP5Q8N3R9 675 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 OTUD6BQ8N6M0 293 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 OR2L3Q8NG85 312 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 OR2A1Q8NGT9 310 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 OR2L8Q8NGY9 312 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 OR4L1Q8NH43 312 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 SLC35B2Q8TB61 432 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 PPP4R1Q8TF05 950 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 HEXDCQ8WVB3 486 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 ITLN2Q8WWU7 325 aaPredicted RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 MIEF2Q96C03 454 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CCDC120Q96HB5 630 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CABS1Q96KC9 395 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 SLX1AQ9BQ83 275 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 DPH7Q9BTV6 452 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF304Q9HCX3 659 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 HCN3Q9P1Z3 774 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 POLG2Q9UHN1 485 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TINAGQ9UJW2 476 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 SH2B3Q9UQQ2 575 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 RUVBL1Q9Y265 456 aaKnown RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CRYL1Q9Y2S2 319 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CAPN6Q9Y6Q1 641 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 PCM1Q15154 2024 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 NSG1A0A0A6YYJ2 146 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF860A6NHJ4 632 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ARHGEF33A8MVX0 844 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 IDSB3KWA1 339 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 E7EVH7 732 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 MAP2K7O14733 419 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 CD3EAPO15446 510 aaKnown RBP6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 FOXS1O43638 330 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 CDC123O75794 336 aaPredicted RBP6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 APRTP07741 180 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 VAMP1P23763 118 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 MGAT1P26572 445 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ARNTP27540 789 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 PTPN7P35236 360 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 RPL22P35268 128 aaKnown RBP6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 RFC3P40938 356 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 KCNJ1P48048 391 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 VPS41P49754 854 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 TNFSF10P50591 281 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 EMP2P54851 167 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 PRAMEP78395 509 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ADORA2A-AS1P86434 159 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 MFAP5Q13361 173 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ITIH4Q14624 930 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 KCNJ11Q14654 390 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 GRM7Q14831 915 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 C3AR1Q16581 482 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 DNAJC21Q5F1R6 531 aaKnown RBP6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ACSBG2Q5FVE4 666 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 MFSD4BQ5TF39 518 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 IRAK1BP1Q5VVH5 260 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ATG9BQ674R7 924 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF324BQ6AW86 544 aaPredicted RBP6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 LRRC8BQ6P9F7 803 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 AFTPHQ6ULP2 937 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 MBOAT1Q6ZNC8 495 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 NLRP9Q7RTR0 991 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 PEX26Q7Z412 305 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 VN1R5Q7Z5H4 357 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 MRGPRGQ86SM5 289 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 KIAA1328Q86T90 577 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 WFDC8Q8IUA0 241 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 DCUN1D3Q8IWE4 304 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 AMER3Q8N944 861 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 TTC29Q8NA56 475 aaPredicted RBP6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 OR9A4Q8NGU2 314 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 TM9SF4Q92544 642 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 DLG3Q92796 817 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 MFSD3Q96ES6 412 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 MMABQ96EY8 250 aaPredicted RBP6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF285Q96NJ3 590 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 IP6K3Q96PC2 410 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 SIGLEC12Q96PQ1 595 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 NPAS2Q99743 824 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 P2RY12Q9H244 342 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 EPS8L2Q9H6S3 715 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 CATSPERZQ9NTU4 200 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 SYBUQ9NX95 663 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 TAC3Q9UHF0 121 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 AMFRQ9UKV5 643 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF148Q9UQR1 794 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 TCAF1Q9Y4C2 921 aa6.49□□□□□ -1.37
PRPF40B-214ENST00000551320 IGHV1-45A0A0A0MS14 117 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 CTAGE15A4D2H0 777 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 FITM1A5D6W6 292 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 KLHL33A6NCF5 533 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 SGK494L7N484 410 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 PCDH17O14917 1159 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms