RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 SOX17Q9H6I2 414 aaPredicted RBP12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 SEMA3GQ9NS98 782 aa12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 ARL15Q9NXU5 204 aa12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 GPR83Q9NYM4 423 aa12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 C5AR2Q9P296 337 aa12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 CTSFQ9UBX1 484 aa12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 ZNF282Q9UDV7 671 aaPredicted RBP12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 CDC23Q9UJX2 597 aa12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 IKZF3Q9UKT9 509 aa12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 G3BP2Q9UN86 482 aaKnown RBP12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 NOVA2Q9UNW9 492 aaKnown RBP12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 SH2B3Q9UQQ2 575 aa12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 MTO1Q9Y2Z2 717 aaKnown RBP12.8□□□□□ -0.36
CR383656.13-201ENST00000550928 IGLV3-12A0A075B6K2 115 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 CXorf49A8MYA2 514 aaPredicted RBP12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 MASP2O00187 686 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 SOCS6O14544 535 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 LCMT2O60294 686 aaKnown RBP12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 PIAS1O75925 651 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 GSTA2P09210 222 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 ZNF37AP17032 561 aaPredicted RBP12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 FBLP22087 321 aaKnown RBP12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 SLC26A3P40879 764 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 GPX6P59796 221 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 RPS15AP62244 130 aaKnown RBP12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 KLC1Q07866 573 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 IGFBP7Q16270 282 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 NDUFA9Q16795 377 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 VWA2Q5GFL6 755 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 KIRREL2Q6UWL6 708 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 SBSNQ6UWP8 590 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 CEP97Q8IW35 865 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 GALNT16Q8N428 558 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 OR4K1Q8NGD4 311 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 FBXO25Q8TCJ0 367 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 ANKRD49Q8WVL7 239 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 PYCR2Q96C36 320 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 TM4SF19Q96DZ7 209 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 MMABQ96EY8 250 aaPredicted RBP12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 VPS39Q96JC1 886 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 CLMPQ9H6B4 373 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 HS3ST3B1Q9Y662 390 aa12.79□□□□□ -0.36
CR383656.13-201ENST00000550928 A0A0A6YYC8 382 aaPredicted RBP12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 PABPN1LA6NDY0 278 aaKnown RBP12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 FAM159BA6NKW6 160 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 I3L1I5 382 aaPredicted RBP12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 CDC7O00311 574 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 P2RX6O15547 441 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 PRPF4O43172 522 aaKnown RBP eCLIP12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 KLHL41O60662 606 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 DPM1O60762 260 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 GUCA1CO95843 209 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 CDH1P12830 882 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 FOXK1P85037 733 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 POU4F1Q01851 419 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 RAPSNQ13702 412 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 DSG2Q14126 1118 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 MYBPC3Q14896 1274 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 PPP1R3AQ16821 1122 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 NADK2Q4G0N4 442 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 ZDHHC24Q6UX98 284 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 VN1R4Q7Z5H5 301 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 AMER3Q8N944 861 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 ABHD11Q8NFV4 315 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 CDKL2Q92772 493 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 VPS50Q96JG6 964 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 OR4K3Q96R72 315 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 MACROD1Q9BQ69 325 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 LRRC1Q9BTT6 524 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 YIPF2Q9BWQ6 316 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 FAM129AQ9BZQ8 928 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 PHACTR1Q9C0D0 580 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 TGIF2Q9GZN2 237 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 DRC3Q9H069 523 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 ZNF552Q9H707 407 aaPredicted RBP12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 POPDC3Q9HBV1 291 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 GPAMQ9HCL2 828 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 TRPC4Q9UBN4 977 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 FBXL4Q9UKA2 621 aa12.78□□□□□ -0.36
CR383656.13-201ENST00000550928 BSNQ9UPA5 3926 aa12.77□□□□□ -0.36
CR383656.13-201ENST00000550928 TCRBV9S1A1TA0A576 114 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 FEZF1A0PJY2 475 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 C1QAP02745 245 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 STATHP02808 62 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 ANXA5P08758 320 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 GRK3P35626 688 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 MAGEA4P43358 317 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 AVPR1BP47901 424 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 CCR8P51685 355 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 EMP2P54851 167 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 SLC12A2P55011 1212 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 SNRPNP63162 240 aaKnown RBP12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 CDKL1Q00532 357 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 SLC7A5Q01650 507 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 CKAP4Q07065 602 aaKnown RBP12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 AIMP2Q13155 320 aaKnown RBP12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 ZNF460Q14592 562 aa12.77□□□□□ -0.37
CR383656.13-201ENST00000550928 RBBP7Q16576 425 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms